Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K23
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 519 HSVTLRKAMTVV---CQILLI*FEEPHNIM*HSKYRNALCCLDKI*GHLN 379
           +S  L K  T++   C +LL+      NI+   K  NA+  L KI   LN
Sbjct: 62  YSTPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLN 111


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 519 HSVTLRKAMTVV---CQILLI*FEEPHNIM*HSKYRNALCCLDKI*GHLN 379
           +S  L K  T++   C +LL+      NI+   K  NA+  L KI   LN
Sbjct: 58  YSTPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLN 107


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/51 (25%), Positives = 20/51 (39%)
 Frame = -3

Query: 202 HLGSGAALTAPRASTNAKTKLKIRTKFILPKFXSAGEFKIPIQYRSTRTLR 50
           HL   +  TA   ++   T   +     +P F S G    P QY+  +  R
Sbjct: 247 HLNRSSPTTATAIASATVTIQNVSNT--IPPFASRGSMHFPNQYQMNQEYR 295


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/51 (25%), Positives = 20/51 (39%)
 Frame = -3

Query: 202 HLGSGAALTAPRASTNAKTKLKIRTKFILPKFXSAGEFKIPIQYRSTRTLR 50
           HL   +  TA   ++   T   +     +P F S G    P QY+  +  R
Sbjct: 195 HLNRSSPTTATAIASATVTIQNVSNT--IPPFASRGSMHFPNQYQMNQEYR 243


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/51 (25%), Positives = 20/51 (39%)
 Frame = -3

Query: 202 HLGSGAALTAPRASTNAKTKLKIRTKFILPKFXSAGEFKIPIQYRSTRTLR 50
           HL   +  TA   ++   T   +     +P F S G    P QY+  +  R
Sbjct: 378 HLNRSSPTTATAIASATVTIQNVSNT--IPPFASRGSMHFPNQYQMNQEYR 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,569
Number of Sequences: 336
Number of extensions: 2656
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)