Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K21
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0076 - 622789-623689,623714-623931                               31   1.7  
11_06_0213 - 21321676-21322069,21322311-21322507,21322818-213234...    29   7.0  
02_01_0260 - 1723476-1723502,1724051-1724148,1724276-1724339,172...    29   7.0  
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701...    28   9.2  

>06_01_0076 - 622789-623689,623714-623931
          Length = 372

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/58 (25%), Positives = 23/58 (39%)
 Frame = +3

Query: 201 FKLSRETCWSGVPNCFSVLPPLENSARNSTVPCMTKPXKGISNCINHVAPCRPLSSTC 374
           F  +    W G  NC  V  P E+S    T   + +P  G ++C+ +  P       C
Sbjct: 297 FSCTNPERWGGKSNCIYVAKPSEDSDEPWTAVELGQPIPGATHCVPYSHPLLRTEGHC 354


>11_06_0213 -
           21321676-21322069,21322311-21322507,21322818-21323477,
           21323522-21323578,21324741-21324848
          Length = 471

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 198 PFKLSRETCWSGVPNCFSVLPPLENSARNSTVPCMTKPXKGISN 329
           PFK S     +  P+ +S LPP+ENS +   +    KP + + +
Sbjct: 68  PFKKSSSKLGTPGPDFWSWLPPVENSTKLGEIDTGLKPSEKLDS 111


>02_01_0260 -
           1723476-1723502,1724051-1724148,1724276-1724339,
           1724458-1724563,1724641-1724677,1724763-1724856,
           1725452-1725568,1726450-1726714,1727329-1727396,
           1727478-1727642
          Length = 346

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 711 NWCPHEPSLXLGTSGVGXXCMXKYRS*SLDGHDNA 607
           +WCPH P+L L  +      +   ++  LDG D A
Sbjct: 311 SWCPHNPNLLLACTKNNKILVWNKKTNKLDGADVA 345


>03_02_0270 -
           7011363-7012302,7013237-7013640,7014264-7014333,
           7014835-7015331,7015959-7016283,7018060-7018292
          Length = 822

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = -1

Query: 233 AAPTCFSR--KFEWFQIWAFD 177
           AAP C +R  K EWFQ+W  D
Sbjct: 442 AAPRCGAREGKDEWFQLWPID 462


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,403,607
Number of Sequences: 37544
Number of extensions: 436946
Number of successful extensions: 808
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)