Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K21
         (932 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p pro...    47   4e-05
AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA...    47   4e-05

>AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p
           protein.
          Length = 494

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 25/59 (42%), Positives = 31/59 (52%)
 Frame = +1

Query: 211 REKHVGAACQTVFPFFPLWKIVRGIAQFHV*RNRXKVSRTASTTLPHVGHCHPHVVEAG 387
           R +H+G ACQ  +   PL KIVRG  Q+       +        + HVGHCHP VV AG
Sbjct: 25  RNQHIGQACQLFYRSDPL-KIVRGQGQYMFDEEGTRY-LDCINNVAHVGHCHPEVVRAG 81



 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 44/128 (34%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
 Frame = +3

Query: 327 NCIN---HVAPCRPLSSTCC*GWVEINCL*ISTNXPXIFTDELVILAQRAREIHYQNHXS 497
           +CIN   HV  C P       G +++    ISTN   +  DELV  A R          S
Sbjct: 62  DCINNVAHVGHCHPEVVRA--GALQMAT--ISTNNRFLH-DELVQCA-RTLTSKMPEPLS 115

Query: 498 VCFLR*XSGVGGLNDLPLRMGXEIHTKKKGCXLPGTTRYHGHLTTMIDISPYXXNLPRRS 677
           VCF    SG    NDL LR+      ++    L     YHGHL +++++SPY  N P   
Sbjct: 116 VCFFV-NSG-SEANDLALRLARNFTKRQDVITLDHA--YHGHLQSVMEVSPYKFNQPGGE 171

Query: 678 REXDWVHV 701
            + D+VHV
Sbjct: 172 AKPDYVHV 179


>AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA
           protein.
          Length = 494

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 25/59 (42%), Positives = 31/59 (52%)
 Frame = +1

Query: 211 REKHVGAACQTVFPFFPLWKIVRGIAQFHV*RNRXKVSRTASTTLPHVGHCHPHVVEAG 387
           R +H+G ACQ  +   PL KIVRG  Q+       +        + HVGHCHP VV AG
Sbjct: 25  RNQHIGQACQLFYRSDPL-KIVRGQGQYMFDEEGTRY-LDCINNVAHVGHCHPEVVRAG 81



 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 44/128 (34%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
 Frame = +3

Query: 327 NCIN---HVAPCRPLSSTCC*GWVEINCL*ISTNXPXIFTDELVILAQRAREIHYQNHXS 497
           +CIN   HV  C P       G +++    ISTN   +  DELV  A R          S
Sbjct: 62  DCINNVAHVGHCHPEVVRA--GALQMAT--ISTNNRFLH-DELVQCA-RTLTSKMPEPLS 115

Query: 498 VCFLR*XSGVGGLNDLPLRMGXEIHTKKKGCXLPGTTRYHGHLTTMIDISPYXXNLPRRS 677
           VCF    SG    NDL LR+      ++    L     YHGHL +++++SPY  N P   
Sbjct: 116 VCFFV-NSG-SEANDLALRLARNFTKRQDVITLDHA--YHGHLQSVMEVSPYKFNQPGGE 171

Query: 678 REXDWVHV 701
            + D+VHV
Sbjct: 172 AKPDYVHV 179


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,155,613
Number of Sequences: 53049
Number of extensions: 729386
Number of successful extensions: 1300
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)