Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K21
         (932 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    44   2e-04
U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical pr...    34   0.17 
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z75543-11|CAA99876.1|  277|Caenorhabditis elegans Hypothetical p...    29   4.8  
AY728064-1|AAU43725.1|  277|Caenorhabditis elegans cadmium-induc...    29   4.8  

>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/55 (40%), Positives = 32/55 (58%)
 Frame = +3

Query: 537 NDLPLRMGXEIHTKKKGCXLPGTTRYHGHLTTMIDISPYXXNLPRRSREXDWVHV 701
           NDL LR+  + +TK K   +     YHGH+TT +++SPY  +      + DWVHV
Sbjct: 135 NDLALRLARD-YTKHKDAIVIEHA-YHGHVTTTMELSPYKFDHGSTVSQPDWVHV 187



 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 211 REKHVGAACQTVFPFFPLWKIVRGIAQFHV*RNRXKVSRTASTTLPHVGHCHPHVVEA 384
           R+  +G+ CQ  +   P + + R   Q+       K     S  + HVGHCHP VVEA
Sbjct: 34  RKDTIGSKCQIFYSDDP-FMVSRASMQYLYDEKSNKFLDCISN-VQHVGHCHPKVVEA 89


>U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical
           protein T01B11.2b protein.
          Length = 160

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 211 REKHVGAACQTVFPFFPLWKIVRGIAQFHV*RNRXKVSRTASTTLPHVGHCHPHVVEA 384
           R+  +G+ CQ  +   P + + R   Q+       K     S  + HVGHCHP VVEA
Sbjct: 34  RKDTIGSKCQIFYSDDP-FMVSRASMQYLYDEKSNKFLDCISN-VQHVGHCHPKVVEA 89


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 234  VPNCFSVLPPLENSARNSTVPCMTKPXKGISNCINHVAPCRPLS 365
            V  C  V   +++    +TVPC+TKP   I  CI  + PC P+S
Sbjct: 932  VDPCEGVTCGIDSLCVPTTVPCVTKPCPTIPRCI--INPC-PIS 972


>Z75543-11|CAA99876.1|  277|Caenorhabditis elegans Hypothetical
           protein K01D12.11 protein.
          Length = 277

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 153 VYNWLYLQIK-CPNLKPFKLSRETCWSGVPNCFSVLPPLENSARNSTVP 296
           VY + + +IK CPNL PF +  E         + V+    + +RN T+P
Sbjct: 46  VYLYQFKRIKSCPNLSPFCMKLEILCRAYNIPYEVVETSMSRSRNGTLP 94


>AY728064-1|AAU43725.1|  277|Caenorhabditis elegans
           cadmium-inducible lysosomal proteinCDR-4 protein.
          Length = 277

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 153 VYNWLYLQIK-CPNLKPFKLSRETCWSGVPNCFSVLPPLENSARNSTVP 296
           VY + + +IK CPNL PF +  E         + V+    + +RN T+P
Sbjct: 46  VYLYQFKRIKSCPNLSPFCMKLEILCRAYNIPYEVVETSMSRSRNGTLP 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,917,533
Number of Sequences: 27780
Number of extensions: 374087
Number of successful extensions: 750
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)