Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K20
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical ...    28   7.3  

>AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical
           protein Y50D7A.1 protein.
          Length = 791

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/74 (17%), Positives = 34/74 (45%)
 Frame = +2

Query: 248 FMFQVQGEVWEVFSALMNRPTRGERRFAYWALFRFLGSLTRCARSFGCGERYQLTQRR*Y 427
           F F+  GE+W +F          ++    W++F+ +  +   +++ G  ++     R+  
Sbjct: 428 FFFEKVGEIWSIFEHFRECGAFWKKFGKIWSIFKKVREIWSISKTAGKPQKLCFFFRKKG 487

Query: 428 GYPQNQGITQERTC 469
             P+N   ++++ C
Sbjct: 488 QKPENIDFSKKKLC 501


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,178,794
Number of Sequences: 27780
Number of extensions: 339937
Number of successful extensions: 644
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)