Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K16
         (995 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   2.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   6.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   6.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   8.5  

>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 886 VYSFNNSSILSSMYDRIPEKLTSIPFTQYGKGXYFFPFLAAC 761
           +Y  + +   S ++  IP  LTS+ +   G   + F F  AC
Sbjct: 489 IYFISKTLAESPIFIIIPVTLTSVCYFMIGLNSHGFRFYIAC 530


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 354 WLPQVSSKGKETPFXPGWGLMVPFLXANWAQXFSPFFK 241
           +L   S   K TP  P  G  +  L A   +  +PFF+
Sbjct: 229 YLQAASMLPKPTPLVPQQGFNMERLLAPSTEVSAPFFR 266


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = -3

Query: 882 ILSIIRQFYPPCTIGYQK-----NLRPFLSHNMVR 793
           +L +++Q Y    I  Q+     NL PFL HN++R
Sbjct: 110 VLHVVKQCYHLQKINVQQSGIFINL-PFLEHNLIR 143


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 886 VYSFNNSSILSSMYDRIPEKLTSIPFTQYGKGXYFFPFLAAC 761
           +Y  + +   S ++  IP  LTS+ +   G     F F  AC
Sbjct: 489 IYFISKTLAESPIFIIIPVILTSVCYFMIGLNSQGFRFYIAC 530


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,645
Number of Sequences: 336
Number of extensions: 4424
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28340642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)