Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K16
         (995 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382          196   2e-50

>05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382
          Length = 441

 Score =  196 bits (479), Expect = 2e-50
 Identities = 98/160 (61%), Positives = 112/160 (70%), Gaps = 2/160 (1%)
 Frame = +3

Query: 462 MGAPWRGCAMVAKPCAKLWKKPITGVNHCXGHIXMGRLITKANNPTVLYVXGGNXQIIAY 641
           MGAP +  A  A+  + LW KP+ GVNHC  H+ MGR +T A +P VLYV GGN Q+IAY
Sbjct: 156 MGAPLQVAAAAARALSLLWGKPLVGVNHCVAHVEMGRAVTGAVDPVVLYVSGGNTQVIAY 215

Query: 642 SXKRYRIXGETIDXXVGNCLXRXAXVWKLSNAPXPXYXIXQAAKXGKKYXPLPYCVKGMD 821
           S  RYRI GETID  VGNCL R A V +LSN P P Y I Q AK G+K+  LPY VKGMD
Sbjct: 216 SEGRYRIFGETIDIAVGNCLDRFARVLELSNDPSPGYNIEQLAKKGEKFIDLPYVVKGMD 275

Query: 822 VSFSGILSYMEDKIDELLK--EYTPEDLCYSLQETVFAXL 935
           VSFSGILS++E    E LK  E TP DLCYSLQET+FA L
Sbjct: 276 VSFSGILSFIEATAIEKLKNNECTPADLCYSLQETLFAML 315


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,905,356
Number of Sequences: 37544
Number of extensions: 467513
Number of successful extensions: 877
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)