Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K16
         (995 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.5  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    26   2.0  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 390  KPWDQSWSQSQMKXTWSVIPKDLVMGAPWRG 482
            K +D++W+   ++  +S+ P D  M   WRG
Sbjct: 1580 KTFDETWATLAVRFLYSLKPNDNGMRFVWRG 1610


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
 Frame = +3

Query: 372 HEVLARKPW-DQSWSQSQMKXTWSVIPKDLVMGAPWRGCAMVAKPCAKLWKKPITGVNHC 548
           ++++    W +QSW   +++  W   PK+      + G  M+  P   +W+  I   N+ 
Sbjct: 71  NQIMTTNLWVEQSWYDYKLR--WE--PKE------YGGVQMLHVPSDHIWRPDIVLYNNA 120

Query: 549 XGHIXMGRLITKA---NNPTVLY 608
            GH  +  L+TKA   NN  V++
Sbjct: 121 DGHYEV-TLMTKATVYNNGMVIW 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 916,374
Number of Sequences: 2352
Number of extensions: 17430
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 109352334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)