Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K15
         (982 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0149 + 15223441-15223568,15223697-15223751,15223936-152239...    31   1.9  
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177...    30   3.2  
12_02_1123 - 26250300-26250362,26251988-26252042,26252128-262522...    29   5.7  
05_01_0207 + 1493224-1493385,1493475-1493839,1494313-1494390,149...    29   5.7  
11_04_0137 + 13909204-13909315,13910002-13910999,13911058-139112...    28   9.9  
08_02_0411 + 16855255-16855644                                         28   9.9  
02_05_0555 - 29937973-29938395,29938509-29938790                       28   9.9  
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700...    28   9.9  

>10_08_0149 +
           15223441-15223568,15223697-15223751,15223936-15223983,
           15224901-15225008
          Length = 112

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 714 GKLPRALSCXXPXPLYRIPVRLFSXSGKRGAFLIAHAVXISXPVXXRXAPSWAVC 878
           G +P+AL+     PL + P+R    SG     L++ AV +S PV      SW +C
Sbjct: 23  GGIPQALADALVCPLSKKPLRYCEDSGS----LVSDAVGVSFPVVPSDT-SWGLC 72


>03_01_0224 -
           1771582-1771727,1771855-1771980,1772489-1772517,
           1772689-1772747,1772816-1772929,1773030-1773238,
           1773347-1774087,1775678-1776238,1776295-1776419,
           1778187-1778317,1779020-1779178,1779471-1779728,
           1780140-1780164,1780531-1780592,1780944-1781003,
           1781112-1781219,1781703-1781838,1781880-1781929,
           1782024-1782096,1782209-1782345,1782441-1782527,
           1782624-1782721,1783259-1783369,1783685-1783769,
           1783880-1783969
          Length = 1259

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +2

Query: 401 WGPLFPAFPRLTDSP 445
           WGP  P FPRL DSP
Sbjct: 603 WGPTPPPFPRLADSP 617


>12_02_1123 -
           26250300-26250362,26251988-26252042,26252128-26252224,
           26252364-26253048,26253354-26253721,26253931-26254074,
           26254925-26255276
          Length = 587

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +3

Query: 606 FXIGSAPPEXAITKIDAQFRGGETRPGX*RYQAFPPGKLPRALSCXXPXPLYRIP 770
           F   +A P  A     +  RG +  PG       PP ++P  L+   P P+  +P
Sbjct: 24  FVTTTAEPAAAAASSSSSPRGSDVYPGSLSPVMIPPPRIPDHLTALSPAPVSLLP 78


>05_01_0207 +
           1493224-1493385,1493475-1493839,1494313-1494390,
           1496134-1496157,1496213-1496654
          Length = 356

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 512 DNPYYRPLSELIPLRRSPNDRAQASQ*GE-GKRERAAPKXRKTRPSSPGGG 363
           D+  ++ +SE   +   P  RA   Q GE G +  AAP    +  SS GGG
Sbjct: 42  DDSLFKQVSEAYDVLSDPQKRAIYDQFGEEGLKAGAAPPPTTSSSSSHGGG 92


>11_04_0137 +
           13909204-13909315,13910002-13910999,13911058-13911267,
           13911522-13912056,13912154-13912461
          Length = 720

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 477 TASPQPERPSAGESVRRGKAGKSGPQIXQNPPF 379
           T +P+  R SAG  V         PQ+ Q PP+
Sbjct: 541 TPAPEYTRGSAGSGVPTSSTAPPRPQVFQTPPY 573


>08_02_0411 + 16855255-16855644
          Length = 129

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -1

Query: 790 EXEKRRTGXR*SGQGXXQESARGSFPGGNAWYLYXPGRV 674
           E E+RR      G+      ARG + GG  W    PG V
Sbjct: 67  ELEERRRRQGRGGEEAAAARARGIWEGGGGWIFQQPGSV 105


>02_05_0555 - 29937973-29938395,29938509-29938790
          Length = 234

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 474 ASPQPERPSAGESVRRGKAGKSGPQIXQNPPFFPRRRLGP 355
           A PQP+R +A  +V R + G+   Q   +PP  P  R GP
Sbjct: 9   APPQPKRSTAAAAVARRRIGRELWQFWLDPP--PYCRPGP 46


>02_04_0513 -
           23569212-23569675,23569759-23569801,23569888-23570000,
           23570099-23570158,23570472-23570541,23570887-23570951,
           23571548-23571685,23571764-23573015
          Length = 734

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +2

Query: 425 PRLTDSPALGRSGCGEAVSAHSKGGNTGYXQNQGDNAGKEHVSKRASKRXETVK 586
           P    SP+   S  G + S    G ++   Q +G + GK   SKR+ +  E  K
Sbjct: 445 PNKCGSPSSSSSDSGSSSSDSESGSDSESEQEKGGSPGKPKGSKRSEQLVEQEK 498


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,783,830
Number of Sequences: 37544
Number of extensions: 459480
Number of successful extensions: 1268
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)