Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_K13
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 0.078
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 0.078
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.22
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.29
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.29
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.50
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.50
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.50
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.50
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 8.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.1
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGG 540
P PP G P PPPP GG
Sbjct: 799 PLPPISSGAPPPPPPPPPGG 818
Score = 28.3 bits (60), Expect(2) = 0.078
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 488 PPPPPXXFFXKKKXXXXPPPPXGG 559
PPPPP PPPP GG
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGG 818
Score = 25.4 bits (53), Expect(2) = 0.078
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 473 PPPXGPPPPP 502
PPP PPPPP
Sbjct: 765 PPPPPPPPPP 774
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGG 540
P PP G P PPPP GG
Sbjct: 799 PLPPISSGAPPPPPPPPPGG 818
Score = 28.3 bits (60), Expect(2) = 0.078
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 488 PPPPPXXFFXKKKXXXXPPPPXGG 559
PPPPP PPPP GG
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGG 818
Score = 25.4 bits (53), Expect(2) = 0.078
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 473 PPPXGPPPPP 502
PPP PPPPP
Sbjct: 765 PPPPPPPPPP 774
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPPXGGGXXXP 574
PP G PPPP PPPP GG P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 473 PPPXG-PPPPPXXFFXKKKXXXXPPPP 550
PPP G PPPPP PPPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPPXGGGXXXP 574
PP G PPPP PPPP GG P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 473 PPPXG-PPPPPXXFFXKKKXXXXPPPP 550
PPP G PPPPP PPPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPPXGGGXXXP 574
PP G PPPP PPPP GG P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 473 PPPXG-PPPPPXXFFXKKKXXXXPPPP 550
PPP G PPPPP PPPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPP 306
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.29
Identities = 32/136 (23%), Positives = 35/136 (25%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPPXGGGXXXPXXXXGXGGXXXKXXFFXFKKKKKXPX 652
PPP P P PPPP G P G
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGM-------PGMP 317
Query: 653 XPXXXXXFXPPXGGGXXXPSXXXXKXXXXFSXXXPPPXPXXPXXFXXXX*XKKXXPXPPS 832
P F PP GG P + + PPP P PP+
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMR----YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 373
Query: 833 PPXKKKXXXXPPPXPP 880
PP PPP PP
Sbjct: 374 PP--SGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.29
Identities = 32/136 (23%), Positives = 35/136 (25%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPPXGGGXXXPXXXXGXGGXXXKXXFFXFKKKKKXPX 652
PPP P P PPPP G P G
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGM-------PGMP 327
Query: 653 XPXXXXXFXPPXGGGXXXPSXXXXKXXXXFSXXXPPPXPXXPXXFXXXX*XKKXXPXPPS 832
P F PP GG P + + PPP P PP+
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMR----YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 383
Query: 833 PPXKKKXXXXPPPXPP 880
PP PPP PP
Sbjct: 384 PP--SGHGMIPPPPPP 397
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 806 KKXXPXPPSPPXKKKXXXXPPPXPPXXXPP 895
K P PP PP PPP PP PP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +2
Query: 473 PPPXGP---PPPPXXFFXKKKXXXXPPPPXGGGXXXPXXXXG 589
PPP GP PPPP F PPPP GG P G
Sbjct: 75 PPPPGPGGIPPPPPMF----AGGIPPPPPMMGGIPPPPPMFG 112
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGG 540
P PP G P PPPP G G
Sbjct: 105 PPPPPMFGAPPPPPPPSGLG 124
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 473 PPPXG--PPPPPXXFFXKKKXXXXPPPPXGGGXXXPXXXXGXGG 598
PP G PPPPP PPPP GG P GG
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGGXXG 531
P PP G P PPPP GG G
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKG 782
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 476 PPXGPPPPPXXFFXKKKXXXXPPPPXG 556
PP PPPPP F K PPPP G
Sbjct: 769 PPPPPPPPPGGF----KGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +2
Query: 473 PPPXG--PPPPPXXFFXKKKXXXXPPPPXGG 559
PP G PPPPP PPPP GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 473 PPPXG--PPPPPXXFFXKKKXXXXPPPPXGGGXXXPXXXXGXGG 598
PP G PPPPP PPPP GG P GG
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGGXXG 531
P PP G P PPPP GG G
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKG 782
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 476 PPXGPPPPPXXFFXKKKXXXXPPPPXG 556
PP PPPPP F K PPPP G
Sbjct: 769 PPPPPPPPPGGF----KGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +2
Query: 473 PPPXG--PPPPPXXFFXKKKXXXXPPPPXGG 559
PP G PPPPP PPPP GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 473 PPPXG--PPPPPXXFFXKKKXXXXPPPPXGGGXXXPXXXXGXGG 598
PP G PPPPP PPPP GG P GG
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGGXXG 531
P PP G P PPPP GG G
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKG 365
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 476 PPXGPPPPPXXFFXKKKXXXXPPPPXG 556
PP PPPPP F K PPPP G
Sbjct: 352 PPPPPPPPPGGF----KGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +2
Query: 473 PPPXG--PPPPPXXFFXKKKXXXXPPPPXGG 559
PP G PPPPP PPPP GG
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +2
Query: 755 PPPXPXXPXXFXXXX*XKKXXPXPPSPP---XKKKXXXXPPPXPP 880
PPP P P F P PP PP PPP PP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 476 PPXGPPPPPXXFFXKKKXXXXPPPP 550
PP PPPPP F PPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPP 633
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +2
Query: 755 PPPXPXXPXXFXXXX*XKKXXPXPPSPP---XKKKXXXXPPPXPP 880
PPP P P F P PP PP PPP PP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 476 PPXGPPPPPXXFFXKKKXXXXPPPP 550
PP PPPPP F PPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPP 459
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPP 550
PPP PPPPP K PPPP
Sbjct: 155 PPP--PPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPP 550
PPP PPPPP K PPPP
Sbjct: 155 PPP--PPPPPPVSVPSSKPTPPPPPP 178
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 476 PPXGPPPPPXXFFXKKKXXXXPPPP 550
PP PPPPP ++ PPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPP 91
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPP 550
PPP PPPP + PPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPP 92
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 806 KKXXPXPPSPPXKKKXXXXPPPXPPXXXPP 895
K P PP PP PP PP PP
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPPPPPP 93
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 473 PPPXG--PPPPPXXFFXKKKXXXXPPPPXGG 559
PPP G PPPPP ++ + PPPP G
Sbjct: 88 PPPHGLGPPPPPPHYYTQ-----PPPPPQSG 113
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGGXXG 531
P PP G GP PPPP GG G
Sbjct: 580 PPPPPMLG-GPPPPPPPPGGLMG 601
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 755 PPPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPP 880
PPP P P P PP PP PPP PP
Sbjct: 562 PPPPPPLPQNL-------SGAPPPPPPPPPMLGGPPPPPPPP 596
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 818 PXPPSPPXKKKXXXXPPPXPP 880
P PP PP + PPP PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPP 581
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 476 PPXGPPPPPXXFFXKKKXXXXPPPPXGGGXXXPXXXXGXGG 598
PP PPP P PPP GG P G G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 473 PPPXGPPPPPXXFFXKKKXXXXPPPP 550
PPP PPPPP PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 755 PPPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPP 880
PPP P P P PP PP PPP PP
Sbjct: 1356 PPPPPPPPTMSKAPT--GVPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 818 PXPPSPPXKKKXXXXPPPXPP 880
P PP PP PPP PP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPP 1361
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 818 PXPPSPPXKKKXXXXPPPXPPXXXPP 895
P PP PP K + PP PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVP 147
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 818 PXPPSPPXKKKXXXXPPPXPPXXXPP 895
P PP PP PP PP PP
Sbjct: 244 PGPPGPPGPPTRRPPGPPGPPTRRPP 269
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 758 PPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPP 880
PP P P P PP PP PPP PP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 473 PPPXGP-PPPPXXFFXKKKXXXXPPPPXGGGXXXP 574
PPP G PPPP F + PPP G P
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP 332
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 473 PPPXGP-PPPPXXFFXKKKXXXXPPPPXGGGXXXP 574
PPP G PPPP F + PPP G P
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP 332
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 758 PPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPP 880
PP P P P PP PP PPP PP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 758 PPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPP 880
PP P P P PP PP PPP PP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 806 KKXXPXPPSPPXKKKXXXXPPPXPP 880
K P PP PP PPP PP
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPP 511
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 755 PPPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPPXXXPP 895
PPP P P PP PP PPP P P
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 755 PPPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPPXXXPP 895
PPP P P P PP P + PP PP PP
Sbjct: 27 PPPCPPPPPPMCAPP----PLPCPPPPICPPQFCPPPPMCPPPPPPP 69
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.2
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 9/106 (8%)
Frame = +2
Query: 473 PPPXGPP------PPPXXFFXKK-KXXXXPPPPXGG--GXXXPXXXXGXGGXXXKXXFFX 625
PP GPP PPP F + PPPP G P G G F
Sbjct: 338 PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPG-----AFAP 392
Query: 626 FKKKKKXPXXPXXXXXFXPPXGGGXXXPSXXXXKXXXXFSXXXPPP 763
P P + PP GG P PPP
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGGXXG 531
P PP G P PPPP G G
Sbjct: 56 PRPPIGYGAPPPPPPPPAFGGLG 78
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGGXXG 531
P PP G P PPPP G G
Sbjct: 56 PRPPIGYGAPPPPPPPPAFGGLG 78
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 599 PXPPXXXGXGPXPPPPXGGGXXG 531
P PP G P PPPP G G
Sbjct: 56 PRPPIGYGAPPPPPPPPAFGGLG 78
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +2
Query: 755 PPPXPXXPXXFXXXX*XKKXXPXPPSPPXKKKXXXXPPPXPP 880
PPP P ++ P PP PP PP PP
Sbjct: 112 PPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 7/37 (18%)
Frame = +2
Query: 473 PPPXGPPP-------PPXXFFXKKKXXXXPPPPXGGG 562
PPP G PP PP F + PPPP G G
Sbjct: 727 PPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRG 763
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,758,747
Number of Sequences: 27780
Number of extensions: 219386
Number of successful extensions: 2250
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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