Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_K11
(897 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 41 0.002
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 33 0.31
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 33 0.41
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.72
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 30 2.2
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 3.9
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_36422| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.7
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.1
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.1
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 5.1
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 5.1
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 6.7
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 6.7
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/104 (27%), Positives = 33/104 (31%), Gaps = 1/104 (0%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDK-XXTXXXXFK 711
PP RG P G P P G PP P G P PPP + +
Sbjct: 290 PPSRGAAPPPPSRGAPPPP------PSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSR 343
Query: 712 GGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
G P PP + P P P P P P G+P
Sbjct: 344 GAPPPPSM--GMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRP 385
Score = 34.3 bits (75), Expect = 0.14
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +2
Query: 563 PPNXGXPPXXKIX-AXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFX 739
PP+ G PP + A P PP PP V GPPP + G PP
Sbjct: 340 PPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPV--GGPPPPPPPIEGRPPSSLGNPPPPPP 397
Query: 740 XXXXLPPXXPPXP 778
PP P P
Sbjct: 398 PGRGAPPPGPMIP 410
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/73 (26%), Positives = 21/73 (28%)
Frame = +1
Query: 631 PKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSX 810
P PP G P PPP + +G PP P P P
Sbjct: 287 PPPPPSRGAAP--PPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRG 344
Query: 811 TPAPLSPXGKPVP 849
P P S P P
Sbjct: 345 APPPPSMGMAPPP 357
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 39.1 bits (87), Expect = 0.005
Identities = 28/107 (26%), Positives = 34/107 (31%)
Frame = +1
Query: 529 FSPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXF 708
+ PP + SP P N P P PP PP +P P P
Sbjct: 132 YPPPPNAPYPPSPN-APYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPP 190
Query: 709 KGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
P PP + P +P P P P P P +P P P
Sbjct: 191 PNPPYPPP--PNAPNPPPPNPPYPPPPNAPNPPYPPPPNAP-NPPYP 234
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/97 (24%), Positives = 27/97 (27%), Gaps = 1/97 (1%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXV-XXPXXSPXXPXP 786
P P PP P P P P P PP + P +P P P
Sbjct: 119 PPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPP 178
Query: 787 XXXPXXSXTPAPLSPXGKPVPFFXXXPXXFXXCPXRP 897
P P P +P P P P P P
Sbjct: 179 YPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = +1
Query: 496 PGPXXXRXXXXFSPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPP 675
P P + PP + P P P P PP PP P PP
Sbjct: 176 PPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPP 235
Query: 676 P 678
P
Sbjct: 236 P 236
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = +1
Query: 622 P*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPX 801
P PP PP +P PPP+ P PP + P +P P P P
Sbjct: 112 PNPPYPPPPNAPYP--PPPNPPYPPPP---NAPYPPS--PNAPYPPPPNPPYPPPLYPPP 164
Query: 802 XSXTP--APLSPXGKPVP 849
+ P AP P P P
Sbjct: 165 PNPPPPNAPYPPPPYPPP 182
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 713 GGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
GG PP F PP PP PP P P
Sbjct: 81 GGHPPTNFSPNPPYPP--PPYPPYPPPPP 107
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = +2
Query: 566 PNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXX 745
PN PP P + PP PP P P PP
Sbjct: 90 PNPPYPPPP-YPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPY 148
Query: 746 XXLPPXXPPXPPXLXPXP 799
PP PP PP L P P
Sbjct: 149 P--PPPNPPYPPPLYPPP 164
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +1
Query: 538 PXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDK 684
P RG P G AP G P GP P+ PP G R PPPD+
Sbjct: 74 PPRGPPRGHPMRGRGAPY-GRGGPPSRGP--PRGPPLPGPPRRGPPPDR 119
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = +2
Query: 611 PXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLX 790
P +NPP PP + PPP T G PP PP P P
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPP 407
Query: 791 PXP 799
P P
Sbjct: 408 PPP 410
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/79 (26%), Positives = 24/79 (30%)
Frame = +2
Query: 545 GGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQP 724
GG + PP PP + P + PP PP PPP G P
Sbjct: 342 GGVNPPPPPTNNPP-----SPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPP 396
Query: 725 PXEFXXXXXLPPXXPPXPP 781
P PP PP
Sbjct: 397 PPPPTNGPPPPPPPTNGPP 415
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 33.1 bits (72), Expect = 0.31
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +1
Query: 544 RGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKX---PPXXGFFPRXPPPDKXXTXXXXFKG 714
R +P G P G P G PP PP G+ PP + G
Sbjct: 10 RAHVRNTPYMGGYPPAAPGGYPPAPGGYPPAPGGYPPSGGY--GYPPAGGYPPPQPGYAG 67
Query: 715 GPTPPGILXSXVXXPXXSPXXPXPXXXP 798
GP PPGI P P P
Sbjct: 68 GPPPPGIAPGIGGPPPSGQYGAPPTSQP 95
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/81 (30%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGG 718
P G PP G PP A GP PP P + GPPP + G
Sbjct: 45 PPSGGYGYPPAGGYPPPQPGYAGGPP----PPGIAPGI---GGPPPSGQYGAPPTSQPYG 97
Query: 719 QPPXE-FXXXXXLPPXXPPXP 778
PP + PP PP P
Sbjct: 98 APPTSGYPGYQQHPP--PPQP 116
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 32.7 bits (71), Expect = 0.41
Identities = 31/112 (27%), Positives = 33/112 (29%), Gaps = 9/112 (8%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFP-----RXPPPDKXXTXX 699
PP P G P G GP PK PP P + PP +
Sbjct: 30 PPPPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIG 89
Query: 700 XXFKGGPT----PPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
GP PPG L P P P P P P P P G P
Sbjct: 90 PPGLPGPNGVNGPPGELGDM--GPPGPPGPPGPQMPPGPPGLPGPPGPAGPP 139
Score = 27.5 bits (58), Expect(2) = 0.91
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +1
Query: 712 GGPTPPGILXSX----VXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
G P PPG+ P P P P P P P P G P P
Sbjct: 602 GQPGPPGVNGPPGEIGEIGPAGLPGPPGPASPPSPPGPPGPPGPKGPPGP 651
Score = 22.6 bits (46), Expect(2) = 0.91
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = +1
Query: 574 GXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPD 681
G P + G GP P+ PP P P P+
Sbjct: 526 GPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPN 561
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.7 bits (71), Expect = 0.41
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXXT-XXXXFKGGPTPPGILXSXVXXPXXSPXXPXP 786
P G PP PP G P PPP GG PP P P
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPL 973
Query: 787 XXXPXXSXTPAPLSPXGKPVP 849
P S P P P P P
Sbjct: 974 PPPPGGSAPPPPPPPPPPPPP 994
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/83 (30%), Positives = 28/83 (33%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGG 718
P GG + PP PP + P N P PP S PPP G
Sbjct: 925 PPGGNAPLPP---PPPGGSAPSQPPPPGGNAPPPPPPPGGS-APPPGGGAPPLPPPPGGS 980
Query: 719 QPPXEFXXXXXLPPXXPPXPPXL 787
PP PP PP PP +
Sbjct: 981 APPP--------PPPPPPPPPPM 995
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 503 PGXXGXXXXFXXPXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPP 676
P G P G PP G PP P H P APP GPPP
Sbjct: 2164 PSPLGAPPSVPPPMGAPPSGPPPMGAPPSGPPPMGTPPSGHPPMGAPP-----MGPPP 2216
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +1
Query: 628 PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXS 807
P PP G PPP GP+P G S P P P P
Sbjct: 2136 PAMGPPPMGSSRYGPPPPMGPARHSP--SGPSPLGAPPSVPPPMGAPPSGPPPMGAPPSG 2193
Query: 808 XTPAPLSPXGKP 843
P P G P
Sbjct: 2194 PPPMGTPPSGHP 2205
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.9 bits (69), Expect = 0.72
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +1
Query: 622 P*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPX 801
P PP PP P PPP + + P PP P P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPP---------PPPPPPPPPPPPPPP 415
Query: 802 XSXTPAPLSPXGKPVP 849
P P P P P
Sbjct: 416 PPPAPPPPPPPPPPPP 431
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 661 PRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGK 840
P PPP P PP P P P P P P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 841 PVP 849
P P
Sbjct: 430 PPP 432
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 31.5 bits (68), Expect = 0.96
Identities = 29/118 (24%), Positives = 32/118 (27%)
Frame = +1
Query: 496 PGPXXXRXXXXFSPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPP 675
PG R P R P P P G P+ PP PR PP
Sbjct: 354 PGSHYSRVPPPDGPYTRALPPGEPYARMPPPGATHPRVPSPGASHPRVPPPGAPHPRVPP 413
Query: 676 PDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
P G P P P P P P + P + P G P P
Sbjct: 414 PGASHQRVRP-PGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPR-VPPPGAPHP 469
Score = 31.1 bits (67), Expect = 1.3
Identities = 29/118 (24%), Positives = 34/118 (28%)
Frame = +1
Query: 496 PGPXXXRXXXXFSPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPP 675
PG R +P R +P P P G P+ PP PR PP
Sbjct: 414 PGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPP 473
Query: 676 PDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
P G P P P P P P + P + P G P P
Sbjct: 474 PGAPHPRVPP-PGAPHPRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPR-VPPPGAPHP 529
Score = 31.1 bits (67), Expect = 1.3
Identities = 29/118 (24%), Positives = 34/118 (28%)
Frame = +1
Query: 496 PGPXXXRXXXXFSPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPP 675
PG R +P R +P P P G P+ PP PR PP
Sbjct: 474 PGAPHPRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPP 533
Query: 676 PDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
P G P P P P P P + P + P G P P
Sbjct: 534 PGAPHPRVPP-PGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPR-VPPPGTPHP 589
Score = 28.7 bits (61), Expect = 6.7
Identities = 31/124 (25%), Positives = 39/124 (31%), Gaps = 6/124 (4%)
Frame = +1
Query: 496 PGPXXXRXXXXFSPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPP 675
PG R +P R +P P + P G P+ PP PR PP
Sbjct: 524 PGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPP 583
Query: 676 PDKXXTXXXXFKGGP----TPPGILXSXVXXPXXSPXXP-XPXXXPXXSXTPAPLSPXGK 840
P G P PPG + P P P P P P +P +
Sbjct: 584 PGTPHPRVPP-PGAPHPKVPPPGAPYQRL--PYSGAYHPRLPPPGPPYQRVPPPGAPIQR 640
Query: 841 -PVP 849
P+P
Sbjct: 641 VPLP 644
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 586 PXKNXGXXPXXGP*PPKXPPXXGFFPRXP---PPDKXXTXXXXFKGGPTPPGILXSXVXX 756
P + P P PP+ PP +P+ P PP + P+PP S
Sbjct: 289 PPRYPPSPPRYPPSPPRYPPSLHRYPQSPLRYPPSPIRYPPLPSRYPPSPPRYPSSHPRY 348
Query: 757 PXXSP-XXPXPXXXP--XXSXTPAPLSPXGKPVPF 852
P P P P P P+PL P+ +
Sbjct: 349 PPSPPRYPPSPPRYPSSHPRYPPSPLRYLPSPIRY 383
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +1
Query: 622 P*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPX 801
P PP PP P PPP P PP + P P P P P
Sbjct: 51 PPPPPSPPAAA--PAAPPPPAAAP------AAPPPPAAPPAAPPPPPPLPAPPPPPAQPA 102
Query: 802 XSXTPAP 822
PAP
Sbjct: 103 PQPPPAP 109
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 718 PTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
P+PP + P +P P P P + P P P P P
Sbjct: 55 PSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPP 98
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 11/90 (12%)
Frame = +2
Query: 563 PPNXGXPPXXKIXAX--GPXXXHNPPXAPPXLVFSQGPPPL-TKXXQXXXXLK------- 712
PP+ PP I + P PP + GP PL + Q ++
Sbjct: 323 PPSQAPPPPKTIPSTLPPPPVPSATSAPPPWATSNSGPKPLMSTPVQRPPGMRPPGAGNG 382
Query: 713 -GGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
GG PP LP PP PP L P
Sbjct: 383 PGGPPPPWSKPGGILPGPPPPGPPMLNMAP 412
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/87 (24%), Positives = 24/87 (27%), Gaps = 1/87 (1%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXX-TXXXXFKGGPTPPGILXSXVXXPXXSPXXPXP 786
P P P P P P P K T P PP + +P P
Sbjct: 214 PPGSPHIPPAPLHPHIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPA 273
Query: 787 XXXPXXSXTPAPLSPXGKPVPFFXXXP 867
P P P P P P+ P
Sbjct: 274 PPNPSIPAPPNPSIPLAPPNPYIPPAP 300
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/96 (26%), Positives = 27/96 (28%)
Frame = +1
Query: 562 SPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILX 741
+P P P P P+ PP P PPP T PT P
Sbjct: 893 APPTTPTTPKPTTPAPPPPLPLAPEPPP-----PLPPPPPPIQTTRPTV---PTTPTTQA 944
Query: 742 SXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
S P P P P PL P P P
Sbjct: 945 STTRPTPPPPTSALPPPIPATQVPPPPLPPLPPPPP 980
>SB_36422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 26.2 bits (55), Expect(2) = 4.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 626 NPPXAPPXLVFSQGPPPL 679
NPP APP F+ PPP+
Sbjct: 28 NPPEAPPLPPFAPLPPPV 45
Score = 21.8 bits (44), Expect(2) = 4.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 752 LPPXXPPXPPXL 787
LPP PP PP +
Sbjct: 41 LPPPVPPPPPAI 52
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPX 789
P P PP PP P PPP T G P P S P P
Sbjct: 686 PPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPPPPG 745
Query: 790 XXP 798
P
Sbjct: 746 QLP 748
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/96 (27%), Positives = 29/96 (30%), Gaps = 3/96 (3%)
Frame = +2
Query: 515 GXXXXFXXPXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPP-PLTKXX 691
G F G PP G PP P H+PP + P GPP P+
Sbjct: 208 GMGKRFPPGRPGGPGMPPG-GPPPFPP--TSDPNMGHHPPISGPPTTSMSGPPIPVHHGM 264
Query: 692 QXXXXLKGGQPPXEFXXXXXLPPXXPP--XPPXLXP 793
P LPP PP PP P
Sbjct: 265 PPQYGPGRRDMPPPGAPPGMLPPGMPPHGMPPGFGP 300
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/99 (28%), Positives = 32/99 (32%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKG 714
PP RG G P KN P G P PP G PP + T +G
Sbjct: 252 PPMRGP----TSGGEPPPPKNAPPPPKRGSSNPPPPPTRG-----PPSNSFTT-----QG 297
Query: 715 GPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSP 831
P PP + P + P P P P P P
Sbjct: 298 PPLPPSRDQAPAPPPPLNATPPPP--PPSRDQVPLPPPP 334
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 631 PKXPPXXGFFPRXPPP--DKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXX 804
P PP P PPP D+ +G PP S S P P P
Sbjct: 308 PAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQP 367
Query: 805 SXTPAPLSPXGKP 843
P P P +P
Sbjct: 368 LGGPPPPPPGRRP 380
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/99 (28%), Positives = 32/99 (32%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKG 714
PP RG G P KN P G P PP G PP + T +G
Sbjct: 164 PPMRGP----TSGGEPPPPKNAPPPPKRGSSNPPPPPTRG-----PPSNSFTT-----QG 209
Query: 715 GPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSP 831
P PP + P + P P P P P P
Sbjct: 210 PPLPPSRDQAPAPPPPLNATPPPP--PPSRDQVPLPPPP 246
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 631 PKXPPXXGFFPRXPPP--DKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXX 804
P PP P PPP D+ +G PP S S P P P
Sbjct: 220 PAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQP 279
Query: 805 SXTPAPLSPXGKP 843
P P P +P
Sbjct: 280 LGGPPPPPPGRRP 292
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +1
Query: 574 GXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGIL 738
G AP P PP PP G P PPP P PP ++
Sbjct: 286 GGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPPTVM 340
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 4/79 (5%)
Frame = +2
Query: 575 GXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLT--KXXQXXXXLKGGQPPXEFXXXX 748
G PP I P P PP + PPP T + G PP
Sbjct: 2 GTPPNTAIPGDPPPNTAIPGDPPPNTTIPRAPPPNTAIPGDRPPNTPIPGDPPPNIPIPG 61
Query: 749 XLPP--XXPPXPPXLXPXP 799
PP P PP P P
Sbjct: 62 NPPPNTPIPGDPPPNTPIP 80
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/106 (24%), Positives = 29/106 (27%)
Frame = +1
Query: 532 SPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFK 711
+PP +P P P PP P G P PPP T
Sbjct: 109 TPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGG-PPPPPPIAPATG----- 162
Query: 712 GGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
G P PP I + P P P P P P P
Sbjct: 163 GPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPP 208
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGG 718
P S PP+ G PP P PP PP L + PPP + +K G
Sbjct: 182 PLAAASPPPPSGGPPP--------PPPPPPPPPPPPILELAAPPPPGSVLGAALTGIKSG 233
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/69 (27%), Positives = 24/69 (34%)
Frame = +2
Query: 476 PFPXQXIXXPGXXGXXXXFXXPXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLV 655
P+P + P G G PP G PP GP + PP PP
Sbjct: 181 PYPEKGGYPPAGVGQHSGPYPGQPGMWGPPPMGGPPPMG-----GPPGGYPPPPPPPGAG 235
Query: 656 FSQGPPPLT 682
PPP++
Sbjct: 236 DPAYPPPVS 244
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGIL 738
P G PP PP G FP PPP K P PPG L
Sbjct: 647 PFFGGIPPP-PPGGGMFPPPPPPPPGGGVPGPPK--PPPPGNL 686
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,717,892
Number of Sequences: 59808
Number of extensions: 190847
Number of successful extensions: 1019
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2574115416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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