Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_K11
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.010
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.010
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.010
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.010
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.010
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.030
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.030
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.030
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.12
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 33 0.37
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.48
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 6.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.9
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 7.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.9
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 7.9
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPX 789
P P PP PP G PR PPP P PPG P P P
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPP---PPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 790 XXPXXSXTPAPLSPXGKPVP 849
P P P G P
Sbjct: 325 FGPPGMGGMPPPPPPGMRYP 344
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/89 (28%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Frame = +1
Query: 586 PXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGG---PTPPGILXSXVXX 756
P + G P P PP P P PPP GG P PPG+
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 757 PXXSPXXP--XPXXXPXXSXTPAPLSPXG 837
P P P P P + P P G
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/83 (30%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +2
Query: 539 PXGGXSXXPPNX-GXPPXXKIXAXGPXXXHN-PPXAPPXLVFSQGPPPLTKXXQXXXXLK 712
P G + PP G PP GP PP PP + + G PP +
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP-PPPPRYPSAGP 360
Query: 713 GGQPPXEFXXXXXLPPXXPPXPP 781
G PP PP PP PP
Sbjct: 361 GMYPPP--------PPSRPPAPP 375
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.010
Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Frame = +2
Query: 545 GGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPP-XLVFSQGPPPLTKXXQXXXXLKGGQ 721
GG S PP G PP P PP PP L G PP + GG
Sbjct: 701 GGSSALPPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 722 PPXEFXXXXXLPPXXPPXPP 781
PP PP PP PP
Sbjct: 759 PPPP-PPPGGCPPPPPPPPP 777
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKG 714
PP G P G P G P PP PP G P PPP FKG
Sbjct: 729 PPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP----PPPGGFKG 782
Query: 715 GPTPP 729
GP PP
Sbjct: 783 GPPPP 787
Score = 34.7 bits (76), Expect = 0.091
Identities = 28/96 (29%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +1
Query: 586 PXKNXGXXPXXGP*PPKXPPXXGFFP--RXPPPDKXXTXXXXFKGGPTPPGILXSXVXXP 759
P G P G PP PP G P PPP GGP PP P
Sbjct: 713 PPPPPGLPPITGG-PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP------PPPP 765
Query: 760 XXSPXXPXPXXXPXXSXTPAPLSPXGKPVPFFXXXP 867
P P P P P P G P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.010
Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Frame = +2
Query: 545 GGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPP-XLVFSQGPPPLTKXXQXXXXLKGGQ 721
GG S PP G PP P PP PP L G PP + GG
Sbjct: 701 GGSSALPPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 722 PPXEFXXXXXLPPXXPPXPP 781
PP PP PP PP
Sbjct: 759 PPPP-PPPGGCPPPPPPPPP 777
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKG 714
PP G P G P G P PP PP G P PPP FKG
Sbjct: 729 PPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP----PPPGGFKG 782
Query: 715 GPTPP 729
GP PP
Sbjct: 783 GPPPP 787
Score = 34.7 bits (76), Expect = 0.091
Identities = 28/96 (29%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +1
Query: 586 PXKNXGXXPXXGP*PPKXPPXXGFFP--RXPPPDKXXTXXXXFKGGPTPPGILXSXVXXP 759
P G P G PP PP G P PPP GGP PP P
Sbjct: 713 PPPPPGLPPITGG-PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP------PPPP 765
Query: 760 XXSPXXPXPXXXPXXSXTPAPLSPXGKPVPFFXXXP 867
P P P P P P G P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPX 789
P P PP PP G PR PPP P PPG P P P
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPP---PPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 790 XXPXXSXTPAPLSPXGKPVP 849
P P P G P
Sbjct: 335 FGPPGMGGMPPPPPPGMRYP 354
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/89 (28%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Frame = +1
Query: 586 PXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGG---PTPPGILXSXVXX 756
P + G P P PP P P PPP GG P PPG+
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 757 PXXSPXXP--XPXXXPXXSXTPAPLSPXG 837
P P P P P + P P G
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/83 (30%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +2
Query: 539 PXGGXSXXPPNX-GXPPXXKIXAXGPXXXHN-PPXAPPXLVFSQGPPPLTKXXQXXXXLK 712
P G + PP G PP GP PP PP + + G PP +
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP-PPPPRYPSAGP 370
Query: 713 GGQPPXEFXXXXXLPPXXPPXPP 781
G PP PP PP PP
Sbjct: 371 GMYPPP--------PPSRPPAPP 385
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.010
Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Frame = +2
Query: 545 GGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPP-XLVFSQGPPPLTKXXQXXXXLKGGQ 721
GG S PP G PP P PP PP L G PP + GG
Sbjct: 284 GGSSALPPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 341
Query: 722 PPXEFXXXXXLPPXXPPXPP 781
PP PP PP PP
Sbjct: 342 PPPP-PPPGGCPPPPPPPPP 360
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKG 714
PP G P G P G P PP PP G P PPP FKG
Sbjct: 312 PPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP----PPPGGFKG 365
Query: 715 GPTPP 729
GP PP
Sbjct: 366 GPPPP 370
Score = 34.7 bits (76), Expect = 0.091
Identities = 28/96 (29%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +1
Query: 586 PXKNXGXXPXXGP*PPKXPPXXGFFP--RXPPPDKXXTXXXXFKGGPTPPGILXSXVXXP 759
P G P G PP PP G P PPP GGP PP P
Sbjct: 296 PPPPPGLPPITGG-PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP------PPPP 348
Query: 760 XXSPXXPXPXXXPXXSXTPAPLSPXGKPVPFFXXXP 867
P P P P P P G P P
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.3 bits (80), Expect = 0.030
Identities = 27/102 (26%), Positives = 31/102 (30%)
Frame = +1
Query: 544 RGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPT 723
RG P P G P G P PP G PPP + + G P
Sbjct: 226 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPP 281
Query: 724 PPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
PP S SP P P + + P G P P
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 31.9 bits (69), Expect = 0.64
Identities = 28/105 (26%), Positives = 29/105 (27%), Gaps = 2/105 (1%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFP--RXPPPDKXXTXXXXF 708
PP G P P P PP PP G P PPP +
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Query: 709 KGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
G P PP P SP P P P P G P
Sbjct: 326 TGSPPPPP--RQKRQAPERSP----PTGSPPTGSPPTGRPPRGGP 364
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGG 718
P G PP G PP + P P PP S PPP GG
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPP---AGG 287
Query: 719 QPPXEFXXXXXLPPXXPPXPP 781
PP PP PP
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPP 308
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/89 (26%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXL--- 709
P S PP G PP + P P PP S PPP + L
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP--PPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 710 -KGGQPPXEFXXXXXLPPXXPPXPPXLXP 793
GG PP PP P P
Sbjct: 316 QAGGSPPPAGTGSPPPPPRQKRQAPERSP 344
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 629 PPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
P +PP +G PPL G PP PP P PP P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 629 PPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
PP P L S PPP G PP P P PP P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.3 bits (80), Expect = 0.030
Identities = 27/102 (26%), Positives = 31/102 (30%)
Frame = +1
Query: 544 RGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPT 723
RG P P G P G P PP G PPP + + G P
Sbjct: 247 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPP 302
Query: 724 PPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
PP S SP P P + + P G P P
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 31.9 bits (69), Expect = 0.64
Identities = 28/105 (26%), Positives = 29/105 (27%), Gaps = 2/105 (1%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFP--RXPPPDKXXTXXXXF 708
PP G P P P PP PP G P PPP +
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Query: 709 KGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
G P PP P SP P P P P G P
Sbjct: 347 TGSPPPPP--RQKRQAPERSP----PTGSPPTGSPPTGRPPRGGP 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGG 718
P G PP G PP + P P PP S PPP GG
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPP---AGG 308
Query: 719 QPPXEFXXXXXLPPXXPPXPP 781
PP PP PP
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPP 329
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/89 (26%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXL--- 709
P S PP G PP + P P PP S PPP + L
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP--PPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 710 -KGGQPPXEFXXXXXLPPXXPPXPPXLXP 793
GG PP PP P P
Sbjct: 337 QAGGSPPPAGTGSPPPPPRQKRQAPERSP 365
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 629 PPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
P +PP +G PPL G PP PP P PP P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 629 PPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
PP P L S PPP G PP P P PP P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.030
Identities = 27/102 (26%), Positives = 31/102 (30%)
Frame = +1
Query: 544 RGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPT 723
RG P P G P G P PP G PPP + + G P
Sbjct: 232 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPP 287
Query: 724 PPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKPVP 849
PP S SP P P + + P G P P
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 31.9 bits (69), Expect = 0.64
Identities = 28/105 (26%), Positives = 29/105 (27%), Gaps = 2/105 (1%)
Frame = +1
Query: 535 PPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFP--RXPPPDKXXTXXXXF 708
PP G P P P PP PP G P PPP +
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Query: 709 KGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
G P PP P SP P P P P G P
Sbjct: 332 TGSPPPPP--RQKRQAPERSP----PTGSPPTGSPPTGRPPRGGP 370
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGG 718
P G PP G PP + P P PP S PPP GG
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPP---AGG 293
Query: 719 QPPXEFXXXXXLPPXXPPXPP 781
PP PP PP
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPP 314
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/89 (26%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXL--- 709
P S PP G PP + P P PP S PPP + L
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP--PPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 710 -KGGQPPXEFXXXXXLPPXXPPXPPXLXP 793
GG PP PP P P
Sbjct: 322 QAGGSPPPAGTGSPPPPPRQKRQAPERSP 350
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 629 PPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
P +PP +G PPL G PP PP P PP P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 629 PPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
PP P L S PPP G PP P P PP P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.12
Identities = 35/122 (28%), Positives = 38/122 (31%), Gaps = 4/122 (3%)
Frame = +1
Query: 496 PGPXXXRXXXXFSPPXRGXFXXS---PKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPR 666
PGP P G F S P G P G P GP P P G P
Sbjct: 437 PGPFNPSGAPPSGGPP-GPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPS--GAPPS 493
Query: 667 XPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLS-PXGKP 843
PP GGP PG P P P P P S +P+ G+P
Sbjct: 494 GGPPGPFNPSGAPPSGGP--PGPFDPSGAPPSGMPPVPLPTDLPIPSESPSFFQWIFGRP 551
Query: 844 VP 849
P
Sbjct: 552 KP 553
Score = 31.1 bits (67), Expect = 1.1
Identities = 28/101 (27%), Positives = 30/101 (29%)
Frame = +2
Query: 476 PFPXQXIXXPGXXGXXXXFXXPXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLV 655
P P P G F S PP P + + GP NP APP
Sbjct: 272 PGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQ-PSGGPPGPFNPSGAPP--- 327
Query: 656 FSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXP 778
S GPP G PP F P PP P
Sbjct: 328 -SGGPP---GPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/81 (30%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Frame = +2
Query: 548 GXSXXPPNXGXP----PXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKG 715
G S PP+ G P P + GP +P APP S GPP
Sbjct: 186 GPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPP----SGGPP---GPFNPSGAPPS 238
Query: 716 GQPPXEFXXXXXLPPXXPPXP 778
G PP F P PP P
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGP 259
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +2
Query: 554 SXXPPNXGXP----PXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQ 721
S PP+ G P P + GP NP APP S GPP G
Sbjct: 233 SGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP----SGGPP---GPFDPSGAPPSGG 285
Query: 722 PPXEFXXXXXLPPXXPPXP 778
PP F P PP P
Sbjct: 286 PPGPFDPSGAPPSGGPPGP 304
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +2
Query: 554 SXXPPNXGXP----PXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQ 721
S PP+ G P P + GP NP APP S GPP G
Sbjct: 383 SGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP----SGGPP---GPFNPSGAPPSGG 435
Query: 722 PPXEFXXXXXLPPXXPPXP 778
PP F P PP P
Sbjct: 436 PPGPFNPSGAPPSGGPPGP 454
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +2
Query: 554 SXXPPNXGXP----PXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQ 721
S PP+ G P P + GP NP APP S GPP G
Sbjct: 398 SGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP----SGGPP---GPFNPSGAPPSGG 450
Query: 722 PPXEFXXXXXLPPXXPPXP 778
PP F P PP P
Sbjct: 451 PPGPFNPSGAPPSGGPPGP 469
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +2
Query: 554 SXXPPNXGXP----PXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQ 721
S PP+ G P P + GP NP APP S GPP G
Sbjct: 413 SGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP----SGGPP---GPFNPSGAPPSGG 465
Query: 722 PPXEFXXXXXLPPXXPPXP 778
PP F P PP P
Sbjct: 466 PPGPFNPSGAPPSGGPPGP 484
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +2
Query: 554 SXXPPNXGXP----PXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQ 721
S PP+ G P P + GP NP APP S GPP G
Sbjct: 428 SGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP----SGGPP---GPFNPSGAPPSGG 480
Query: 722 PPXEFXXXXXLPPXXPPXP 778
PP F P PP P
Sbjct: 481 PPGPFDPSGAPPSGGPPGP 499
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +2
Query: 554 SXXPPNXGXP----PXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQ 721
S PP+ G P P + GP NP APP S GP T G
Sbjct: 173 SGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPP----SGGP---TGPFDPSGAPPSGG 225
Query: 722 PPXEFXXXXXLPPXXPPXP 778
PP F P PP P
Sbjct: 226 PPGPFNPSGAPPSGGPPGP 244
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/75 (28%), Positives = 24/75 (32%)
Frame = +1
Query: 619 GP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXP 798
GP PK PP P + G P PPG + P SP P P
Sbjct: 184 GPKGPKGPPGAPGAPEHQESQECPRGEPLIPGEPGPPG--EAGPQGPPGSPGQPGADGSP 241
Query: 799 XXSXTPAPLSPXGKP 843
P P G+P
Sbjct: 242 GQPGPKGPNGPDGQP 256
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 610 PXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPP 729
P GP PP+ P GF P PPP G P PP
Sbjct: 722 PGVGPPPPQGIPPMGFDPNKPPPPMFQQGFN--AGAPPPP 759
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/103 (26%), Positives = 33/103 (32%)
Frame = +1
Query: 529 FSPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXF 708
++PP + AP + G P PP+ P G F PPP +
Sbjct: 308 YAPPQQQQQQFGAPPPQGAPQQGFGAPPQG---PPQGGPPQGSF-GAPPPQQFHAPSPQS 363
Query: 709 KGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXG 837
GGP PP P P P S AP P G
Sbjct: 364 FGGPPPPVSSAPGNFAPPPQSGPPG-AFAPPPSAFGAPQGPGG 405
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/93 (24%), Positives = 28/93 (30%)
Frame = +1
Query: 565 PKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXS 744
P AP + G P P P G P +G P P G S
Sbjct: 155 PNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGS 214
Query: 745 XVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
P +P P P + P P P G+P
Sbjct: 215 Q--GPPGAPGQPGSGNAPGPAGPPGPAGPNGQP 245
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/91 (27%), Positives = 26/91 (28%)
Frame = +1
Query: 568 KXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSX 747
K G N G P P P PP P PP KG PPG
Sbjct: 111 KPGAPGLNGNPGRPPKE-PCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPG--PPG 167
Query: 748 VXXPXXSPXXPXPXXXPXXSXTPAPLSPXGK 840
P P P P P P P G+
Sbjct: 168 PEGPNGEPGNKGPAGPPGPGGKPGPAGPPGE 198
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +1
Query: 628 PPKXPPXXGFFPRXPPPDKXXTXXXXFKGG-PTPPGILXSXVXXPXXSPXXPXPXXXPXX 804
PP P GF P P P F GG P PP ++ P P P
Sbjct: 66 PPPVP--NGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGL 123
Query: 805 SXTPAPLSP 831
P P P
Sbjct: 124 GVAPQPPRP 132
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/73 (27%), Positives = 24/73 (32%)
Frame = +1
Query: 631 PKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSX 810
P PP G P P D + GP P S P P P P
Sbjct: 172 PSGPPSPG--PVDPSEDPQPSGSS--SPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPP 227
Query: 811 TPAPLSPXGKPVP 849
+P P+ P +P P
Sbjct: 228 SPGPVDPSDEPSP 240
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/83 (24%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Frame = +1
Query: 595 NXGXXPXXGP*PPKXPPXXGFFP----RXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPX 762
N P PP P P PPP + P PP +L
Sbjct: 459 NSAIAPINANAPPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTN 518
Query: 763 XSPXXPXPXXXPXXSXTPAPLSP 831
P P P P + P P P
Sbjct: 519 APPPPPMPGMAPLSTGAPTPPPP 541
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/70 (25%), Positives = 21/70 (30%)
Frame = +1
Query: 622 P*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXPX 801
P PP P G P PPP P PP + +P P P
Sbjct: 488 PPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPP-MPGMAPLSTGAPTPPPPPPVGM 546
Query: 802 XSXTPAPLSP 831
+ P P P
Sbjct: 547 ANGGPPPPPP 556
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/80 (27%), Positives = 26/80 (32%)
Frame = +2
Query: 539 PXGGXSXXPPNXGXPPXXKIXAXGPXXXHNPPXAPPXLVFSQGPPPLTKXXQXXXXLKGG 718
P G + N PP A PP PP + + GPPP LKG
Sbjct: 508 PLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPP--PPPLPLDLLKGA 565
Query: 719 QPPXEFXXXXXLPPXXPPXP 778
+ PP PP P
Sbjct: 566 VAGLKSVPGGPPPPPPPPPP 585
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/93 (23%), Positives = 27/93 (29%)
Frame = +1
Query: 565 PKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXS 744
P AP + G P P P G P +G P P G
Sbjct: 155 PNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGA--P 212
Query: 745 XVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
P +P P P + P P P G+P
Sbjct: 213 GPQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQP 245
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/93 (23%), Positives = 27/93 (29%)
Frame = +1
Query: 565 PKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFKGGPTPPGILXS 744
P AP G P P P G P + +G P P G
Sbjct: 153 PNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSG--RP 210
Query: 745 XVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
P +P P P + P P P G+P
Sbjct: 211 GPQGPPGAPGQPGSGSTPGPAGPPGPPGPNGQP 243
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 629 PPXAPPXLVFSQGPPPLTKXXQXXXXLKGGQPPXEFXXXXXLPPXXPPXPPXLXPXP 799
PP PP PPPL PP PP PP PP + P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPIC------PPQFCPPPPMCPPPPPPPPPPMCPPP 77
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.9
Identities = 27/104 (25%), Positives = 30/104 (28%)
Frame = +1
Query: 532 SPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFK 711
SP RG + + G P G P P P G PP
Sbjct: 184 SPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPG--DSGPPGPPGPPGAPGND 241
Query: 712 GGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
G P PPG P +P P S P P P G P
Sbjct: 242 GPPGPPG--------PKGAPGPDGPPGVDGQSGPPGPPGPAGTP 277
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 7.9
Identities = 27/104 (25%), Positives = 30/104 (28%)
Frame = +1
Query: 532 SPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFK 711
SP RG + + G P G P P P G PP
Sbjct: 179 SPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPG--DSGPPGPPGPPGAPGND 236
Query: 712 GGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
G P PPG P +P P S P P P G P
Sbjct: 237 GPPGPPG--------PKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/71 (28%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +1
Query: 622 P*PPKXPPXXGFFPRXPPP-DKXXTXXXXFKGGPTPPGILXSXVXXPXXSPXXPXPXXXP 798
P PP+ G P PPP T PP S P +P P P P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Query: 799 XXSXTPAPLSP 831
+P P P
Sbjct: 185 RTPPSPIPPPP 195
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 7.9
Identities = 27/104 (25%), Positives = 30/104 (28%)
Frame = +1
Query: 532 SPPXRGXFXXSPKXGXXAPXKNXGXXPXXGP*PPKXPPXXGFFPRXPPPDKXXTXXXXFK 711
SP RG + + G P G P P P G PP
Sbjct: 179 SPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPG--DSGPPGPPGPPGAPGND 236
Query: 712 GGPTPPGILXSXVXXPXXSPXXPXPXXXPXXSXTPAPLSPXGKP 843
G P PPG P +P P S P P P G P
Sbjct: 237 GPPGPPG--------PKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,443,508
Number of Sequences: 27780
Number of extensions: 198100
Number of successful extensions: 1002
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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