Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K10
         (1163 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    35   0.14 
12_02_0299 - 17051570-17052474,17053542-17053755                       29   7.0  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
 Frame = +2

Query: 920  PPHPPPG-----EKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXX 1084
            PP PPPG              GG   P + P    +   P        G P     PP  
Sbjct: 1110 PPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGP---PAPPPP 1166

Query: 1085 XGXFXGXPPPKXXGGXXPP 1141
             G   G PPP   GG  PP
Sbjct: 1167 AGFRGGTPPPNAHGGVAPP 1185



 Score = 32.7 bits (71), Expect = 0.57
 Identities = 21/73 (28%), Positives = 22/73 (30%)
 Frame = +2

Query: 923  PHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFXG 1102
            PH PP          GG   P S P     P          GG P      P   G +  
Sbjct: 1042 PHHPPERPHYLPGEVGGAPSPPSPPP----PQRENTSVGIQGGIPPLPPPLPPTLGDYGV 1097

Query: 1103 XPPPKXXGGXXPP 1141
             PPP   G   PP
Sbjct: 1098 APPPPSIGAGAPP 1110



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 19/70 (27%), Positives = 22/70 (31%)
 Frame = +2

Query: 920  PPHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFX 1099
            PP PPP ++        G   P   P    L            G    +  PP   G   
Sbjct: 1062 PPSPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIG--AGAPPPPPPPGGIT 1119

Query: 1100 GXPPPKXXGG 1129
            G PPP   GG
Sbjct: 1120 GVPPPPPIGG 1129


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +1

Query: 925  PPPPXGKXXXFXFXXGPPXPXFXXXXXXTPXXPP 1026
            PPPP      F F   PP P F       P  PP
Sbjct: 289  PPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPP 322


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,544,413
Number of Sequences: 37544
Number of extensions: 454444
Number of successful extensions: 645
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3549867584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)