Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K10
         (1163 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128191-1|AAI28192.1|  183|Homo sapiens PRB4 protein protein.         33   2.0  
K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.                   33   2.6  
BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.         33   2.6  

>BC128191-1|AAI28192.1|  183|Homo sapiens PRB4 protein protein.
          Length = 183

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 26/81 (32%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
 Frame = +2

Query: 923  PHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFX- 1099
            P PPPG K       GG       P   K    P        GKP     PP   G    
Sbjct: 71   PPPPPG-KPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGKP---QGPPQQEGNKPQ 126

Query: 1100 GXPPPKXXGGXXPPGKXTXXP 1162
            G PPP    G  PPG     P
Sbjct: 127  GPPPPGKPQGPPPPGGNPQQP 147


>K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.
          Length = 198

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
 Frame = +2

Query: 923  PHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFXG 1102
            P PPPG+        G        P   + P             PG    PP   G   G
Sbjct: 50   PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQG 109

Query: 1103 XPPP--KXXGGXXPPGKXTXXP 1162
             PP       G  PPGK    P
Sbjct: 110  PPPQGGNKPQGPPPPGKPQGPP 131


>BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.
          Length = 198

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
 Frame = +2

Query: 923  PHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFXG 1102
            P PPPG+        G        P   + P             PG    PP   G   G
Sbjct: 50   PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQG 109

Query: 1103 XPPP--KXXGGXXPPGKXTXXP 1162
             PP       G  PPGK    P
Sbjct: 110  PPPQGGNKPQGPLPPGKPQGPP 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,091,100
Number of Sequences: 237096
Number of extensions: 2898785
Number of successful extensions: 4187
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3837
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16238637850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)