Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_K10
(1163 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.13
AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical ... 30 2.7
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.13
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = +2
Query: 920 PPHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFX 1099
PP PPPG GG P + P GG P PP G F
Sbjct: 727 PPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPGGFK 781
Query: 1100 GXPPPKXXGGXXPP 1141
G PPP G P
Sbjct: 782 GGPPPPPPPGMFAP 795
Score = 32.3 bits (70), Expect = 0.67
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +1
Query: 925 PPPPXGKXXXFXFXXGPPXPXFXXXXXXTPXXPPGXFXGXXGXTGXFXXXPPXGGXIPGX 1104
PPPP G PP P P PPG F G P IP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Query: 1105 SPP 1113
PP
Sbjct: 804 LPP 806
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 925 PPPPXGKXXXFXFXXGPPXPXFXXXXXXTPXXPPGXFXGXXGXTGXFXXXPPXGGXIPGX 1104
PPPP G PP P P PP G +G PP G P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPP 771
Query: 1105 SPPXXXRG 1128
PP G
Sbjct: 772 PPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.13
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = +2
Query: 920 PPHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFX 1099
PP PPPG GG P + P GG P PP G F
Sbjct: 727 PPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPGGFK 781
Query: 1100 GXPPPKXXGGXXPP 1141
G PPP G P
Sbjct: 782 GGPPPPPPPGMFAP 795
Score = 32.3 bits (70), Expect = 0.67
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +1
Query: 925 PPPPXGKXXXFXFXXGPPXPXFXXXXXXTPXXPPGXFXGXXGXTGXFXXXPPXGGXIPGX 1104
PPPP G PP P P PPG F G P IP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Query: 1105 SPP 1113
PP
Sbjct: 804 LPP 806
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 925 PPPPXGKXXXFXFXXGPPXPXFXXXXXXTPXXPPGXFXGXXGXTGXFXXXPPXGGXIPGX 1104
PPPP G PP P P PP G +G PP G P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPP 771
Query: 1105 SPPXXXRG 1128
PP G
Sbjct: 772 PPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.13
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = +2
Query: 920 PPHPPPGEKXXXXXXXGGXXXPXSXPXXXKLPXXPXXXXXXXGGKPGXSXXPPXXXGXFX 1099
PP PPPG GG P + P GG P PP G F
Sbjct: 310 PPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPGGFK 364
Query: 1100 GXPPPKXXGGXXPP 1141
G PPP G P
Sbjct: 365 GGPPPPPPPGMFAP 378
Score = 32.3 bits (70), Expect = 0.67
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +1
Query: 925 PPPPXGKXXXFXFXXGPPXPXFXXXXXXTPXXPPGXFXGXXGXTGXFXXXPPXGGXIPGX 1104
PPPP G PP P P PPG F G P IP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 386
Query: 1105 SPP 1113
PP
Sbjct: 387 LPP 389
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 925 PPPPXGKXXXFXFXXGPPXPXFXXXXXXTPXXPPGXFXGXXGXTGXFXXXPPXGGXIPGX 1104
PPPP G PP P P PP G +G PP G P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPP 354
Query: 1105 SPPXXXRG 1128
PP G
Sbjct: 355 PPPPPPGG 362
>AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical
protein C03H5.5 protein.
Length = 558
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -3
Query: 165 PNQTKTKPNXQIKTFFXFX*TXSSFSPNCQRNLKL 61
PNQ K +I+TF F SSF P RN KL
Sbjct: 351 PNQMKDWKEAKIETFLSFFAECSSFIPQLPRNNKL 385
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 366 PTVWGPNXRTGYPQGGLSLAEXGPLNXSGKXRKXLGQXVVPGKSGMLLKFGGKS 527
P GPN + G+P G S GP +G GQ PG G + G +S
Sbjct: 149 PGPQGPNGQPGHPGQGGSQGPAGPRGPAGDAGAP-GQVGAPGNPGQAGRGGQRS 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,075,340
Number of Sequences: 27780
Number of extensions: 371693
Number of successful extensions: 722
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3172075232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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