Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K07
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434     29   4.8  
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166           28   8.5  
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275...    28   8.5  

>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
          Length = 418

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 387 GMRVPVRLSPXPFTLSRASPXEXALSLWRSLKSADPMAL 271
           G   P R+SP    L+   P E ALS  RSL S  P ++
Sbjct: 138 GEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSI 176


>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
          Length = 545

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 217 SVRVHCEAAGLSPRTCRHVXT 155
           S+R+HC A  L+PR CR   T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421


>07_01_0370 +
           2749353-2749786,2749949-2750346,2750435-2750519,
           2751200-2751314,2751538-2751591
          Length = 361

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 274 AEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 164
           A  V++ AG R   GG GG V VH  AA  SP  T RH
Sbjct: 17  AASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,251,231
Number of Sequences: 37544
Number of extensions: 216939
Number of successful extensions: 534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)