Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K05
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601...    31   1.2  
12_02_0416 - 18891945-18892319,18892416-18892550,18892634-18893638     30   2.1  
10_02_0144 + 5815403-5815520,5815551-5816314                           30   2.8  
01_05_0560 - 23288078-23288370,23288448-23288733                       30   2.8  
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496...    29   4.8  
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    29   4.8  
01_01_0206 - 1770622-1771347                                           29   4.8  

>05_02_0047 +
           6006808-6007129,6009229-6009890,6009980-6010129,
           6010765-6010857,6011370-6011675
          Length = 510

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 99  FSSGAVLCSGFVPEVHPADLQATANTAPDNTYSATSWPG-TAMAVSRVTMFL 251
           F++G +L +GFV  +H A+   ++   P + + +  +PG  AM+ +  T+ L
Sbjct: 181 FAAGVILATGFVHMLHDAEHALSSPCLPAHPWRSFPFPGFVAMSAALATLVL 232


>12_02_0416 - 18891945-18892319,18892416-18892550,18892634-18893638
          Length = 504

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 24/73 (32%), Positives = 33/73 (45%)
 Frame = +3

Query: 372 EHSHHTVDTGLDQPIESHRNTRDLRFLYPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASE 551
           + S  TVDT L        N ++L FL  RG  P P  PP  P P+ +   +     A+ 
Sbjct: 137 DSSRDTVDTWLRSAAVD--NLQELEFLSNRGGAPPPPSPP-PPPPVSLFRFSYTLHIATI 193

Query: 552 DQEELRHYDEHFL 590
            + EL+H   H L
Sbjct: 194 SRCELQHTTVHEL 206


>10_02_0144 + 5815403-5815520,5815551-5816314
          Length = 293

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 159 QATANTAPDNTYSATSWPGTAMAVSRVTMFLXAPSTADHPILPSK 293
           Q  A  +   T+ +T WP T + ++       APSTA   + PS+
Sbjct: 136 QIRARRSSSPTWGSTGWPPTPLRLAEHVTAAGAPSTATDLVEPSR 180


>01_05_0560 - 23288078-23288370,23288448-23288733
          Length = 192

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3

Query: 249 LXAPSTADHPILPSKIDDVQLDPNRRYVRS 338
           L  P  A H +L S  DDV  DP+ RYV S
Sbjct: 120 LPRPLRAGHYVLSSPPDDVDHDPDHRYVFS 149


>11_01_0620 -
           4964263-4965052,4965578-4965663,4966332-4966413,
           4967052-4967156,4967600-4967772,4967988-4968101,
           4973939-4974037,4974320-4974398,4975424-4975492,
           4975955-4976061
          Length = 567

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 233 KGDNVPRCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK*R 361
           +G +VP  ++  +P DS F++    A++KP   S+   SR+ R
Sbjct: 525 RGSSVPTASRQTKPEDSLFKDLVDFAKNKPSSPSKPANSRRTR 567


>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 258  PSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 389
            P T  H I  S +DD+     R  VR   +P+N ++ +  S +T
Sbjct: 2067 PETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110


>01_01_0206 - 1770622-1771347
          Length = 241

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 450 LYPRGKL-PVPTLPPFNPKP 506
           L+  GKL PVP LPP +PKP
Sbjct: 68  LFAGGKLLPVPPLPPVHPKP 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,057,195
Number of Sequences: 37544
Number of extensions: 475856
Number of successful extensions: 1339
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)