Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K03
         (964 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   1.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   1.2  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   3.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   8.2  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    22   8.2  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 193 SSVLPSNGRAGL*ESRSHDFVDHGGPMRRTTVASATGL--NVRNT 321
           SS+ P N   G+  S  +  ++   P   T +ASAT    NV NT
Sbjct: 228 SSLPPGNNIHGMAPSVMYPHLNRSSPTTATAIASATVTIQNVSNT 272


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 193 SSVLPSNGRAGL*ESRSHDFVDHGGPMRRTTVASATGL--NVRNT 321
           SS+ P N   G+  S  +  ++   P   T +ASAT    NV NT
Sbjct: 176 SSLPPGNNIHGMAPSVMYPHLNRSSPTTATAIASATVTIQNVSNT 220


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 193 SSVLPSNGRAGL*ESRSHDFVDHGGPMRRTTVASATGL--NVRNT 321
           SS+ P N   G+  S  +  ++   P   T +ASAT    NV NT
Sbjct: 359 SSLPPGNNIHGMAPSVMYPHLNRSSPTTATAIASATVTIQNVSNT 403


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 221 PDCENPEVTISLTT 262
           P+CENPE  + ++T
Sbjct: 14  PECENPETELLVST 27


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 393 FIYMYRXYTNFINNSEFRYTF 331
           FIY+Y   T+ +  S+  YT+
Sbjct: 21  FIYLYWQQTSNLTTSKLLYTY 41


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 896 PPLGXXDTRXPQPERP 849
           PPLG    + PQP  P
Sbjct: 9   PPLGPLRFKAPQPAEP 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,950
Number of Sequences: 336
Number of extensions: 3406
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27202879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)