Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K03
         (964 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0105 + 756998-757225,757311-758597                               33   0.45 
01_03_0025 + 11739930-11740493,11740820-11741020,11741143-117412...    32   0.78 
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    31   1.4  
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519...    30   3.2  
08_02_0266 + 15051868-15052286,15052376-15052475,15053540-150535...    29   7.3  
06_01_1043 - 8190268-8190624,8190858-8191021,8191112-8191226,819...    29   7.3  
04_04_0425 - 25121344-25121603,25121696-25121838,25122144-251223...    28   9.6  
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399...    28   9.6  

>08_01_0105 + 756998-757225,757311-758597
          Length = 504

 Score = 32.7 bits (71), Expect = 0.45
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 334 ICQFSCSEHLGRSQKQLWYVAWAHRGQRNRDF 239
           +C F CS + G   + LW  +W HR  RN  F
Sbjct: 233 VCPFYCS-YSGYHDELLWGASWLHRASRNASF 263


>01_03_0025 +
           11739930-11740493,11740820-11741020,11741143-11741235,
           11741355-11742125
          Length = 542

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 349 RIPVHICQFSCSEHLGRSQKQLWYVAWAHRGQRN 248
           R+  ++C + CS + G   + LW  AW HR  +N
Sbjct: 270 RLSPYVCPYYCS-YSGYQDELLWGAAWLHRATKN 302


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 478 GYXXXFXFFFFXFXFFFF 425
           GY   F FFFF F FFFF
Sbjct: 84  GYAFFFFFFFFFFFFFFF 101


>01_06_1547 -
           38150814-38151488,38151608-38151666,38151774-38151919,
           38152078-38152274,38152542-38152920,38153000-38153031
          Length = 495

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 126 GSCRLRHRATFSKRENARK-VNIQFCIALKWPSRTVRIPKSRFR*PRWAHATYHSC 290
           G+  L HR  F++ +N+   VNI   +  KW S       +R R   W +  Y  C
Sbjct: 280 GNAALLHRYGFTEMDNSYDIVNIDLALVTKWCSSKYSRRYARARVSLWHNLGYSGC 335


>08_02_0266 +
           15051868-15052286,15052376-15052475,15053540-15053581,
           15053734-15053930,15055412-15055508,15055604-15055699,
           15056395-15056633,15056728-15056811,15056898-15057185,
           15057658-15057718,15061093-15061362,15061663-15061722
          Length = 650

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 352 FRIPVHICQFSCSEHLGRSQKQLW 281
           F  PVH C F C +   RSQ QLW
Sbjct: 357 FTCPVHWC-FECKQIEDRSQTQLW 379


>06_01_1043 -
           8190268-8190624,8190858-8191021,8191112-8191226,
           8192905-8192958,8194064-8194225,8194311-8194403,
           8194581-8194988,8195112-8195306
          Length = 515

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 334 ICQFSCSEHLGRSQKQLWYVAWAHRGQRNRDF 239
           +C   C ++ G   + LW  AW H+  R R++
Sbjct: 221 VCPCYC-DYSGYKDELLWGAAWLHKASRRREY 251


>04_04_0425 -
           25121344-25121603,25121696-25121838,25122144-25122348,
           25122453-25122590,25122999-25123185,25123519-25123852,
           25123930-25124018,25124088-25124231,25124514-25124603
          Length = 529

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -1

Query: 409 NRHF*FYL--HV*XLHKFY*QFRIPVHICQ-FSCSEHLGRSQKQLWYVAW 269
           NRH+ FY+   V  +H        PV++   FS    LG+SQ +LW +++
Sbjct: 406 NRHYTFYIWRKVIQVHWMMKYILTPVYVYSWFSIVNILGKSQTRLWVLSF 455


>01_07_0111 - 41137822-41138973,41139453-41139540,41139850-41139969,
            41140165-41140211,41140796-41141029,41141305-41141505,
            41141506-41143407,41144140-41145303,41145574-41145879
          Length = 1737

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 123  CGSCRLRHRATFSKRENARKVNIQFCIALKW 215
            C    +RH     + E+ARK N++  + L+W
Sbjct: 952  CRELEVRHLENVERLEDARKANLRDMVELRW 982


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,807,762
Number of Sequences: 37544
Number of extensions: 361273
Number of successful extensions: 954
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)