Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K03
         (964 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    33   0.44 
AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p pro...    29   9.5  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 33.5 bits (73), Expect = 0.44
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = +2

Query: 173  CPKGEHSVLYCP--QMAEPD--CENPEVTISLTTVGPC 274
            C    H V YCP  ++  P   C+ P VTI L   GPC
Sbjct: 8918 CDSSRHPVCYCPDNKIGNPFRLCDKPAVTIELCQPGPC 8955


>AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p protein.
          Length = 1608

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +2

Query: 341  RNSELLIKFV*XLYM*IKLEMSVCSTXXKKKKXKXKKKK 457
            R   L++  V  LY+  +  ++V S   KKKK K KKKK
Sbjct: 1570 RRHFLIVSLVLILYLSDEFAINVHSERKKKKKKKKKKKK 1608


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,930,298
Number of Sequences: 53049
Number of extensions: 625150
Number of successful extensions: 1653
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4812612705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)