Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_K03
         (964 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    23   4.1  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   5.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   9.5  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   9.5  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   9.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   9.5  

>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 328 QFSCSEHLGRSQKQLWYVAWAHRGQRNRDFGILTVRL 218
           +FS S HL  +Q ++W+     + +R ++  I  +RL
Sbjct: 41  EFSSSLHLTETQVKIWFQNRRAKAKRLQEAEIEKLRL 77


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 346 IPVHICQFSCSEHLGRSQKQLW 281
           IP + C+  CS +L  S  ++W
Sbjct: 48  IPSYACRGRCSSYLQVSGSKIW 69


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 152 NIFQTRKCPKGEHSVLYCPQMAEPDC 229
           N+  T KC K EH V  C +  E  C
Sbjct: 117 NLIDT-KCYKLEHPVTGCGERTEGRC 141


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 152 NIFQTRKCPKGEHSVLYCPQMAEPDC 229
           N+  T KC K EH V  C +  E  C
Sbjct: 122 NLIDT-KCYKLEHPVTGCGERTEGRC 146


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 152 NIFQTRKCPKGEHSVLYCPQMAEPDC 229
           N+  T KC K EH V  C +  E  C
Sbjct: 122 NLIDT-KCYKLEHPVTGCGERTEGRC 146


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 404 TFLILFTCIXFTQILLTIQNSGTHLPV 324
           TF + F    FTQ  L +     HLP+
Sbjct: 177 TFKLTFDNRAFTQASLAMTREEKHLPI 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,540
Number of Sequences: 438
Number of extensions: 4265
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31686018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)