Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_K02
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 38 0.011
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 38 0.011
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 38 0.011
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.019
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.019
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.019
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 36 0.034
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 36 0.034
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 34 0.10
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 34 0.14
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 33 0.18
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 33 0.31
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.55
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.55
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.55
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.55
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.96
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 1.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 2.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.9
AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical ... 29 2.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.9
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 3.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 5.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 5.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 5.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 5.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 6.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 6.7
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 28 6.7
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 28 6.7
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 6.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 6.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 8.9
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 8.9
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP GG P PPPP PP G
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVG 243
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP P APPPPP PP
Sbjct: 234 PPPPP--LPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP GG P PPPP PP G
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVG 229
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP P APPPPP PP
Sbjct: 220 PPPPP--LPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP GG P PPPP PP G
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVG 229
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP P APPPPP PP
Sbjct: 220 PPPPP--LPPVGAGAPPPPPPPPP 241
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPPP GG P + PPPPP PP GG
Sbjct: 744 PPPPPGGL-PPISGGPPPPP--PPPGG 767
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP--XXPPXGG 428
PPPP GG P PPPPP PP G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISG 756
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGGK 431
PPPP GG PPPPP PP G K
Sbjct: 761 PPPPPGG-------CPPPPPPPPPGGFK 781
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 692 PPXXXXXXXGGXXPXXFXXGGXPPPPPP 775
PP GG P GG PPPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +3
Query: 333 PXFFXPPPPXGGFXPXLXXAPPPPP--XXPPXGG 428
P PPP G P PPPPP PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP GGF PPPPP PP
Sbjct: 773 PPPPPGGF----KGGPPPPP--PP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPPP GG P + PPPPP PP GG
Sbjct: 744 PPPPPGGL-PPISGGPPPPP--PPPGG 767
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP--XXPPXGG 428
PPPP GG P PPPPP PP G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISG 756
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGGK 431
PPPP GG PPPPP PP G K
Sbjct: 761 PPPPPGG-------CPPPPPPPPPGGFK 781
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 692 PPXXXXXXXGGXXPXXFXXGGXPPPPPP 775
PP GG P GG PPPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +3
Query: 333 PXFFXPPPPXGGFXPXLXXAPPPPP--XXPPXGG 428
P PPP G P PPPPP PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP GGF PPPPP PP
Sbjct: 773 PPPPPGGF----KGGPPPPP--PP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPPP GG P + PPPPP PP GG
Sbjct: 327 PPPPPGGL-PPISGGPPPPP--PPPGG 350
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP--XXPPXGG 428
PPPP GG P PPPPP PP G
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISG 339
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGGK 431
PPPP GG PPPPP PP G K
Sbjct: 344 PPPPPGG-------CPPPPPPPPPGGFK 364
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 692 PPXXXXXXXGGXXPXXFXXGGXPPPPPP 775
PP GG P GG PPPPPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +3
Query: 333 PXFFXPPPPXGGFXPXLXXAPPPPP--XXPPXGG 428
P PPP G P PPPPP PP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 323
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP GGF PPPPP PP
Sbjct: 356 PPPPPGGF----KGGPPPPP--PP 373
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPP G P APPPPP PP G
Sbjct: 615 PPPQSFGMAPISSAAPPPPPPPPPMG 640
Score = 35.1 bits (77), Expect = 0.059
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G APPPPP PP G
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPPPPSG 659
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPPP G P + PPPP PP G
Sbjct: 635 PPPPMG--LPAVGAGAPPPPPPPPPSG 659
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGGKKXXG 443
PPPP + A PPPP PP G G
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVG 645
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 307 GXXPXFLXGPXFFXPPPXXGVXXPXXXXPPPPPXXXP 417
G P P PPP G+ PPPPP P
Sbjct: 621 GMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPP G P APPPPP PP G
Sbjct: 441 PPPQSFGMAPISSAAPPPPPPPPPMG 466
Score = 35.1 bits (77), Expect = 0.059
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G APPPPP PP G
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPPPPSG 485
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPPP G P + PPPP PP G
Sbjct: 461 PPPPMG--LPAVGAGAPPPPPPPPPSG 485
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGGKKXXG 443
PPPP + A PPPP PP G G
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVG 471
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 307 GXXPXFLXGPXFFXPPPXXGVXXPXXXXPPPPPXXXP 417
G P P PPP G+ PPPPP P
Sbjct: 447 GMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 324 FXGPXFFXPPPPXGGFXPXLXXAPPPPPXXPPXG 425
F P PPP P APPPPP PP G
Sbjct: 785 FTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 324 FXGPXFFXPPPPXGGFXPXLXXAPPPPPXXPPXG 425
F P PPP P APPPPP PP G
Sbjct: 785 FTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPPP L APPPPP PP G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLG 587
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPPP P + PPPPP PP GG
Sbjct: 577 PPPPP---PPPMLGGPPPPP--PPPGG 598
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 351 PPPXGGFXPXLXXAPPPPPXXPPXG 425
PPP P L PPPPP PP G
Sbjct: 576 PPPPPPPPPMLGGPPPPPP--PPGG 598
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP L APPPPP PP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPP 92
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXP 416
PPPP F P + PPPPP P
Sbjct: 58 PPPPAYPFAPQVFTQPPPPPPPP 80
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G P AP PPP PP G
Sbjct: 521 PPPPMPGMAPLSTGAPTPPP-PPPVG 545
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP 407
PPPP G P APPPPP
Sbjct: 505 PPPPLLGIAPMSTNAPPPPP 524
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXP 416
PPPP G PPPPP P
Sbjct: 539 PPPPPVGM---ANGGPPPPPPLP 558
Score = 23.0 bits (47), Expect(2) = 2.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 393 PPPPPXXPP 419
PPPPP PP
Sbjct: 577 PPPPPPPPP 585
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
PPP GG P L PP PP PP GG
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPP--PPNGG 1609
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGGKKXXG 443
PPPP L PPPPP PP K G
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPP-PPPTMSKAPTG 1371
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 351 PPPXGGFXPXLXXAPPPPP 407
PPP F P + PPPPP
Sbjct: 1377 PPPPPLFSPSMILPPPPPP 1395
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G P A PPP PP G
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPP----PXXPPXGG 428
PPP G P +PPPP P PP GG
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G P A PPP PP G
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPP----PXXPPXGG 428
PPP G P +PPPP P PP GG
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G P A PPP PP G
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPP----PXXPPXGG 428
PPP G P +PPPP P PP GG
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 348 PPPPXGGF--XPXLXXAPPPPPXXPPXG 425
PPP GG P + APPPPP PP G
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPP--PPSG 122
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +3
Query: 333 PXFFXPPPPXGGF---XPXLXXAPPPPP 407
P FF PPP GF P PPPPP
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPP 88
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 333 PXFFXPPPPXGGFXPXLXXAPPPPPXXPPXGG 428
P PPPP G P PPPPP PP G
Sbjct: 37 PACAPPPPPMCGCAP-----PPPPPPPPPMCG 63
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGGKKXXG 443
PPPP GG APPPPP GG G
Sbjct: 43 PPPPCGGG----YEAPPPPPPPSYAGGPSYAG 70
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 333 PXFFXPPPPX--GGFXPXLXXAPPPPPXXPP 419
P PPPP F P PPPPP PP
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 333 PXFFXPPPPXGGFXPXLXXAPPPPPXXPP 419
P F PPPP P PPPPP PP
Sbjct: 52 PPQFCPPPPMCPPPP----PPPPPPMCPP 76
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
P PP P APPPPP PP
Sbjct: 126 PNPPRTCCPPPTPAAPPPPPPPPP 149
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 334 PXFFXPPPXXGVXXPXXXXPPPPP 405
P F PPP G+ P PPP P
Sbjct: 318 PPFMPPPPHFGMGPPRGFMPPPHP 341
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 PXFFXPPPPXGGF---XPXLXXAPPPPPXXPP 419
P F PPPP G F P PPP PP
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPP 323
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 335 PFFXXPPPXGGF-XXPXXKXPPPPP 406
P+ PPP G F P PPPPP
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 334 PXFFXPPPXXGVXXPXXXXPPPPP 405
P F PPP G+ P PPP P
Sbjct: 318 PPFMPPPPHFGMGPPRGFMPPPHP 341
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 PXFFXPPPPXGGF---XPXLXXAPPPPPXXPP 419
P F PPPP G F P PPP PP
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPP 323
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 335 PFFXXPPPXGGF-XXPXXKXPPPPP 406
P+ PPP G F P PPPPP
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPPPPP 309
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G PPPPP P G
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAG 359
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP G P PPPPP P
Sbjct: 288 PPPPSSGMWP---PPPPPPPGRTP 308
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +3
Query: 348 PPPPXGGFXPX-LXXAPPPPP 407
PPPP F P + PPPPP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPP 338
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 350 PPPXGGFXXPXXKXPPPPPXXXPXGG 427
PPP G P PPPPP P G
Sbjct: 335 PPPPPGMRYPGGMPPPPPP-RYPSAG 359
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXG 425
PPPP G PPPPP P G
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAG 369
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP G P PPPPP P
Sbjct: 298 PPPPSSGMWP---PPPPPPPGRTP 318
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +3
Query: 348 PPPPXGGFXPX-LXXAPPPPP 407
PPPP F P + PPPPP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPP 348
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 350 PPPXGGFXXPXXKXPPPPPXXXPXGG 427
PPP G P PPPPP P G
Sbjct: 345 PPPPPGMRYPGGMPPPPPP-RYPSAG 369
>AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical
protein W04C9.6 protein.
Length = 659
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 339 FFXPPPPXGGFXPXLXXAP-PPPPXXPP 419
F P PP P + AP PPPP PP
Sbjct: 477 FLPPSPPSYVMAPMIRMAPAPPPPPMPP 504
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 362 GGFXXPXXKXPPPPPXXXPXGGXKXXGGGXF 454
GG+ P PPPPP P GG +
Sbjct: 293 GGYSAPAAAPPPPPPPPPPPAPAPVSSGGGY 323
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 362 GGFXXPXXKXPPPPPXXXPXGGXKXXGGGXF 454
GG+ P PPPPP P GG +
Sbjct: 293 GGYSAPAAAPPPPPPPPPPPAPAPVSSGGGY 323
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 348 PPPPXG--GFXPXLXXAPPPPPXXPP 419
PPPP P APPPPP PP
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPP 142
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPPP PPPPP PP
Sbjct: 498 PPPPLPPIATPSSVPPPPPPPPPP 521
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 447 PPPXXFXPPXGXXXGGGGGXXXXGXXNPPXGG 352
PPP PP G GGGG P GG
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 447 PPPXXFXPPXGXXXGGGGGXXXXGXXNPPXGG 352
PPP PP G GGGG P GG
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP 407
PPP G L APPPPP
Sbjct: 679 PPPMPGDLSSLLAAAPPPPP 698
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP 407
P PP GG + PPPPP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP 407
PPP G L APPPPP
Sbjct: 679 PPPMPGDLSSLLAAAPPPPP 698
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP 407
P PP GG + PPPPP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPP 681
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXP 416
PPPP P PPPPP P
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKP 98
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXP 416
PPPP P PPPPP P
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKP 320
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
P PP F P + +P P P PP
Sbjct: 288 PLPPSSSFAPSISASPAPAPPPPP 311
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
P PP F P + +P P P PP
Sbjct: 290 PLPPSSSFAPSISASPAPAPPPPP 313
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +3
Query: 330 GPXFFXPPPPXGGFXPXLXXAPPPPP---XXPPXGGKKXXGXXXFFFXKKXPPXXXXXXK 500
GP + PPPP G P P P PP GG G F P
Sbjct: 405 GPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGA 464
Query: 501 KGG 509
GG
Sbjct: 465 PGG 467
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 339 FFXPPPPXGGFXPX-LXXAPPPPPXXPP 419
FF PPP P + PPPPP PP
Sbjct: 149 FFDQPPPTPIPTPVPILEPPPPPPPVPP 176
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 321 FFXGPXFFXPPPPXGGFXPXLXXAPPPPP 407
++ P PPPP P L PPPPP
Sbjct: 2270 YYKSPNLIPPPPPGYMHTPPL--PPPPPP 2296
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 342 FXPPPPXGGFXPXLXXAPPPPPXXPPXGGK 431
F PPPP F P PPPPP GK
Sbjct: 47 FGPPPPP--FGPVGYALPPPPPNGYALPGK 74
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 330 GPXFFXPPPPXGGFXPXLXXAPPPPPXXPPXGG 428
GP PPPP GG + PPPP GG
Sbjct: 765 GPMSSFPPPPRGG----MHHMPPPPSFRGGRGG 793
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPP 407
PPPP + P PPPPP
Sbjct: 134 PPPPPPHYPPPPPHYPPPPP 153
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPP 419
PPP F P PPPPP P
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMP 80
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +3
Query: 348 PPPPXGG---FXPXLXXAPPPPPXXPP 419
P PP G F P PPPPP PP
Sbjct: 425 PFPPHHGHHHFPPFWPPCPPPPPFWPP 451
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 348 PPPPXGGFXPXLXXAPPPPPXXPPXGG 428
P PP P APPPPP PP GG
Sbjct: 318 PSPPL--LPPVCPPAPPPPP--PPIGG 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,699,446
Number of Sequences: 27780
Number of extensions: 273414
Number of successful extensions: 5181
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2387
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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