Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J23
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 48 1e-05
01_06_0824 - 32243495-32244319,32244449-32244859 45 7e-05
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 41 0.001
11_01_0767 + 6438648-6438809,6439146-6440000 39 0.005
11_02_0014 - 7352619-7352918,7353173-7353418 38 0.011
11_02_0011 - 7337618-7338496,7338596-7338991 37 0.019
11_01_0750 - 6315126-6315896,6316371-6316784 37 0.019
05_06_0044 - 25150322-25151260 37 0.019
11_02_0012 - 7346282-7347136,7347234-7347593 36 0.034
01_01_1152 + 9170628-9171899 32 0.72
01_06_1152 + 34939884-34941824 31 1.3
11_01_0771 + 6453130-6454488 30 2.2
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMM-YKRXDYXYGXSAVLNAQLIEIPY 830
+A+YFKGAW+ KFD T D +F++ K+++ P M + Y N +++++PY
Sbjct: 248 NALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFMSTSKKQYILSYD---NLKVLKLPY 304
Query: 831 --XGD--QSSLIVXLPK 869
GD Q S+ + LP+
Sbjct: 305 QQGGDKRQFSMYILLPE 321
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIEIPY- 830
+A+YFKGAW+ KFD T D +F++ ++++ P M R S+ + +++++PY
Sbjct: 500 NALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTRKKQY--LSSYDSLKVLKLPYL 557
Query: 831 -XGD--QSSLIVXLPK 869
GD Q S+ + LP+
Sbjct: 558 QGGDKRQFSMYILLPE 573
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 45.2 bits (102), Expect = 7e-05
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 7/180 (3%)
Frame = +3
Query: 243 KALSSRAFSVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQNSRVKAVXFRSIKGVE 422
K L+ S+ LA L + GET ++++ +G G + S V G
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 423 LKMGETSIR---S*WWKTRREFLQSFP---GDVFISDVQNIDF-SKNTVAAKSINDWGRX 581
G +R W ++ D + ++ + + F K A + IN+W
Sbjct: 92 DDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFES 151
Query: 582 KYX*PH*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMM 761
F + +A+YFKG W SKFD R TSD FY+ + P M
Sbjct: 152 ATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM 211
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMM-YKRXDYXYGXSAVLNAQLIEIPY 830
+A+YFKGAW+ KFD T D +F + K++ P M + Y S+ + +++++PY
Sbjct: 40 NALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMSTSKKQY---LSSYDSLKVLKLPY 96
Query: 831 XGD----QSSLIVXLPK 869
Q S+ + LP+
Sbjct: 97 QKGRDLRQFSMYILLPE 113
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIEIPY 830
+AIYFKG W + FD+ T++R+F +++VP M + + + +++ +PY
Sbjct: 93 NAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPY 151
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIEIPYX 833
+AIYFKG WS F T+ F+ ++ V M R D G N ++++PY
Sbjct: 121 NAIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIGFYDGFN--VLKLPYN 178
Query: 834 G 836
G
Sbjct: 179 G 179
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYG 788
+AIYFKG WS+ F T+ F+ ++ VP M R D G
Sbjct: 171 NAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIG 215
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 37.1 bits (82), Expect = 0.019
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Frame = +3
Query: 495 GDVFISDVQNIDF-SKNTVAAKSINDWGRXKYX*PH*GFS*SGLAQLSHSGCSRHAIYFK 671
G+V+ S + DF +K A IN W + +G + A+YF+
Sbjct: 123 GNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFR 182
Query: 672 GAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIEIPYXGDQS-- 845
G W + D R T+++ FY +++VP + D + N ++I++PY ++
Sbjct: 183 GRWLDRDDLRRTTEQKFYCLDGTSVEVP--FVEYDRTRLFAVHDNFKVIKLPYKQGKNER 240
Query: 846 --SLIVXLPKD 872
S+ + LP D
Sbjct: 241 KFSMYIFLPDD 251
>05_06_0044 - 25150322-25151260
Length = 312
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 618 GLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMM 761
G +S S +++YF W F LT + DF+VS D ++VP M
Sbjct: 70 GGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 36.3 bits (80), Expect = 0.034
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIEIPY 830
+AIYFKG WS+ F T+ F+ ++ P M R D G +++++PY
Sbjct: 159 NAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQYIGFYD--GFKVLKLPY 215
>01_01_1152 + 9170628-9171899
Length = 423
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIEIPY 830
+A++FKG WS F T F++ ++ P M + +A +++PY
Sbjct: 194 NAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPY 252
>01_06_1152 + 34939884-34941824
Length = 646
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 336 LSKALHGFHHQKLKLTEREEAAPKMPERTMLFPWIIFHYFGKHSGCEVIVSIFE 175
L AL FH + L + +E +MPER+++ + +G H ++ V +FE
Sbjct: 310 LCNALINFHARCGSLAQAQELFDEMPERSVVSWTTLIIGYGMHGQGDIAVDLFE 363
>11_01_0771 + 6453130-6454488
Length = 452
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFY 725
+AIYFKG W F+E T + FY
Sbjct: 208 NAIYFKGKWDRPFNESDTERKPFY 231
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,273,262
Number of Sequences: 37544
Number of extensions: 400467
Number of successful extensions: 892
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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