BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J23
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 53 3e-07
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 52 8e-07
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 52 8e-07
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 52 8e-07
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 52 8e-07
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 52 8e-07
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 52 8e-07
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 52 8e-07
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 43 3e-04
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 43 3e-04
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 42 5e-04
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 42 5e-04
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 36 0.053
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 36 0.053
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 29 3.5
Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical pr... 29 6.1
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 52.8 bits (121), Expect = 3e-07
Identities = 47/205 (22%), Positives = 97/205 (47%)
Frame = +3
Query: 282 LAQLALASDGETHEELLKAIGFPGRRCYTKQNSRVKAVXFRSIKGVELKMGETSIRS*WW 461
LA + + G T +EL +G G R + + + ++AV GVE K+ + +
Sbjct: 36 LALIHAGACGSTQKELEDVLG--GSRIFEEFSGLMEAVGDTD-NGVETKIVNRVFVNQAY 92
Query: 462 KTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH*GFS*SGLAQLSHS 641
+++L++ ++ + +++DFS+ AAK++N + + A + +
Sbjct: 93 TIHQDYLETVE-KLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFA 151
Query: 642 GCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIE 821
+A+YFK W SKF + T+ R+F+ S ++ ++P + + ++ VL Q++
Sbjct: 152 FLV-NAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVL-FQVLS 209
Query: 822 IPYXGDQSSLIVXLPKDRMAFXSEL 896
+ Y + +L + LPK R L
Sbjct: 210 LKYADPKFTLAIFLPKQRFGLVDAL 234
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 51.6 bits (118), Expect = 8e-07
Identities = 43/220 (19%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Frame = +3
Query: 243 KALSSRAFSVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGV 419
++L+ S+ L+ + +A+ GET +++ +A+ +Q+ + + A + +G
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 420 ELKMGETSIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH 599
E+K+ +K ++ +L ++ + ++DF A++IN++ R
Sbjct: 83 EVKLANHVFTRAGFKIKQSYLDDVK-KLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 600 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMY-KRXD 776
S +A+YFK W +KF + T +F+ S D ++ ++
Sbjct: 142 KKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS 201
Query: 777 YXYGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY + +L + LPK R L
Sbjct: 202 RDYAEND--QFQVLSLPYKDNTFALTIFLPKTRFGLTESL 239
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 51.6 bits (118), Expect = 8e-07
Identities = 43/220 (19%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Frame = +3
Query: 243 KALSSRAFSVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGV 419
++L+ S+ L+ + +A+ GET +++ +A+ +Q+ + + A + +G
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 420 ELKMGETSIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH 599
E+K+ +K ++ +L ++ + ++DF A++IN++ R
Sbjct: 83 EVKLANHVFTRAGFKIKQSYLDDVK-KLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 600 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMY-KRXD 776
S +A+YFK W +KF + T +F+ S D ++ ++
Sbjct: 142 KKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS 201
Query: 777 YXYGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY + +L + LPK R L
Sbjct: 202 RDYAEND--QFQVLSLPYKDNTFALTIFLPKTRFGLTESL 239
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 51.6 bits (118), Expect = 8e-07
Identities = 43/220 (19%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Frame = +3
Query: 243 KALSSRAFSVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGV 419
++L+ S+ L+ + +A+ GET +++ +A+ +Q+ + + A + +G
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 420 ELKMGETSIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH 599
E+K+ +K ++ +L ++ + ++DF A++IN++ R
Sbjct: 83 EVKLANHVFTRAGFKIKQSYLDDVK-KLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 600 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMY-KRXD 776
S +A+YFK W +KF + T +F+ S D ++ ++
Sbjct: 142 KKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS 201
Query: 777 YXYGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY + +L + LPK R L
Sbjct: 202 RDYAEND--QFQVLSLPYKDNTFALTIFLPKTRFGLTESL 239
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 51.6 bits (118), Expect = 8e-07
Identities = 43/220 (19%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Frame = +3
Query: 243 KALSSRAFSVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGV 419
++L+ S+ L+ + +A+ GET +++ +A+ +Q+ + + A + +G
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 420 ELKMGETSIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH 599
E+K+ +K ++ +L ++ + ++DF A++IN++ R
Sbjct: 83 EVKLANHVFTRAGFKIKQSYLDDVK-KLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 600 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMY-KRXD 776
S +A+YFK W +KF + T +F+ S D ++ ++
Sbjct: 142 KKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS 201
Query: 777 YXYGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY + +L + LPK R L
Sbjct: 202 RDYAEND--QFQVLSLPYKDNTFALTIFLPKTRFGLTESL 239
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 51.6 bits (118), Expect = 8e-07
Identities = 43/220 (19%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Frame = +3
Query: 243 KALSSRAFSVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGV 419
++L+ S+ L+ + +A+ GET +++ +A+ +Q+ + + A + +G
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 420 ELKMGETSIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH 599
E+K+ +K ++ +L ++ + ++DF A++IN++ R
Sbjct: 83 EVKLANHVFTRAGFKIKQSYLDDVK-KLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 600 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMY-KRXD 776
S +A+YFK W +KF + T +F+ S D ++ ++
Sbjct: 142 KKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS 201
Query: 777 YXYGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY + +L + LPK R L
Sbjct: 202 RDYAEND--QFQVLSLPYKDNTFALTIFLPKTRFGLTESL 239
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 51.6 bits (118), Expect = 8e-07
Identities = 43/220 (19%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Frame = +3
Query: 243 KALSSRAFSVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGV 419
++L+ S+ L+ + +A+ GET +++ +A+ +Q+ + + A + +G
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 420 ELKMGETSIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH 599
E+K+ +K ++ +L ++ + ++DF A++IN++ R
Sbjct: 83 EVKLANHVFTRAGFKIKQSYLDDVK-KLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 600 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMY-KRXD 776
S +A+YFK W +KF + T +F+ S D ++ ++
Sbjct: 142 KKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS 201
Query: 777 YXYGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY + +L + LPK R L
Sbjct: 202 RDYAEND--QFQVLSLPYKDNTFALTIFLPKTRFGLTESL 239
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 51.6 bits (118), Expect = 8e-07
Identities = 47/205 (22%), Positives = 96/205 (46%)
Frame = +3
Query: 282 LAQLALASDGETHEELLKAIGFPGRRCYTKQNSRVKAVXFRSIKGVELKMGETSIRS*WW 461
LA + + G T +EL +G G R + + + ++AV GVE K+ + +
Sbjct: 36 LALIHAGACGSTQKELEDVLG--GSRIFEEFSGLMEAVGDTD-NGVETKIVNRVFVNQAY 92
Query: 462 KTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDWGRXKYX*PH*GFS*SGLAQLSHS 641
+++L++ ++ + +++DFS+ AAK++N + + A + +
Sbjct: 93 TIHQDYLETVE-KLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFA 151
Query: 642 GCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXSAVLNAQLIE 821
+A+YFK W SKF + T+ R+F+ S ++ ++P + ++ VL Q++
Sbjct: 152 FLV-NAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVL-FQVLS 209
Query: 822 IPYXGDQSSLIVXLPKDRMAFXSEL 896
+ Y + +L + LPK R L
Sbjct: 210 LKYADPKFTLAIFLPKQRFGLVDAL 234
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 42.7 bits (96), Expect = 3e-04
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 8/218 (3%)
Frame = +3
Query: 267 SVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGVELKMGETS 443
S+ L+ + +A+ GET +E+ KA+ +Q+ S + A + KG E+ +
Sbjct: 40 SIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHI 99
Query: 444 IRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDW------GRXKYX*PH*G 605
+ ++ +L ++ + ++F +A++IN++ G K
Sbjct: 100 FSRKTFTIKKLYLNDVK-KLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDS 158
Query: 606 FS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKR-XDYX 782
S +A L++ A YFK W +KF + T R+F+ S + + ++ R +
Sbjct: 159 ISEELVAVLTN------AFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRK 212
Query: 783 YGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY +L + LPK R L
Sbjct: 213 YSENG--QFQVLSLPYKDTSFALSIFLPKTRFGLSEAL 248
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 574 VEXNTXNRIKDLVNPDSLSSATAAVL 651
V NT IK ++NPDS+S AVL
Sbjct: 142 VSENTKGHIKKIINPDSISEELVAVL 167
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 42.7 bits (96), Expect = 3e-04
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 8/218 (3%)
Frame = +3
Query: 267 SVLPPLAQLALASDGETHEELLKAIGFPGRRCYTKQN-SRVKAVXFRSIKGVELKMGETS 443
S+ L+ + +A+ GET +E+ KA+ +Q+ S + A + KG E+ +
Sbjct: 40 SIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHI 99
Query: 444 IRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDW------GRXKYX*PH*G 605
+ ++ +L ++ + ++F +A++IN++ G K
Sbjct: 100 FSRKTFTIKKLYLNDVK-KLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDS 158
Query: 606 FS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKR-XDYX 782
S +A L++ A YFK W +KF + T R+F+ S + + ++ R +
Sbjct: 159 ISEELVAVLTN------AFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRK 212
Query: 783 YGXSAVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Y + Q++ +PY +L + LPK R L
Sbjct: 213 YSENG--QFQVLSLPYKDTSFALSIFLPKTRFGLSEAL 248
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 574 VEXNTXNRIKDLVNPDSLSSATAAVL 651
V NT IK ++NPDS+S AVL
Sbjct: 142 VSENTKGHIKKIINPDSISEELVAVL 167
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 42.3 bits (95), Expect = 5e-04
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
Frame = +3
Query: 267 SVLPPLAQLALASDGETHEELLKAI--GFPGRRCYTKQNSRVKAVXFRSIKGVELKMGET 440
S+L LA + L + G T ++ ++ G + + + S + + S+ VE +
Sbjct: 37 SILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQ-FIEHFSFINKLLNSSVNDVETLIANR 95
Query: 441 SIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDW--GRXKYX*PH*GFS* 614
S R+ F + + ++ IDF K+ AAK +N + K P
Sbjct: 96 LFVSPEQAIRKAFTDELR-EHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPD-MIKP 153
Query: 615 SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXS 794
L + +AI+F+G W KF E ++ +F +S + VPM+ + DY Y
Sbjct: 154 DNLKDVD--AILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYFYNKD 209
Query: 795 AVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Q+I IP+ + + LP R A L
Sbjct: 210 D--EWQVIGIPFKDKSAWFAIFLPTRRFALAENL 241
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 42.3 bits (95), Expect = 5e-04
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
Frame = +3
Query: 267 SVLPPLAQLALASDGETHEELLKAI--GFPGRRCYTKQNSRVKAVXFRSIKGVELKMGET 440
S+L LA + L + G T ++ ++ G + + + S + + S+ VE +
Sbjct: 37 SILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQ-FIEHFSFINKLLNSSVNDVETLIANR 95
Query: 441 SIRS*WWKTRREFLQSFPGDVFISDVQNIDFSKNTVAAKSINDW--GRXKYX*PH*GFS* 614
S R+ F + + ++ IDF K+ AAK +N + K P
Sbjct: 96 LFVSPEQAIRKAFTDELR-EHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPD-MIKP 153
Query: 615 SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRXDYXYGXS 794
L + +AI+F+G W KF E ++ +F +S + VPM+ + DY Y
Sbjct: 154 DNLKDVD--AILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYFYNKD 209
Query: 795 AVLNAQLIEIPYXGDQSSLIVXLPKDRMAFXSEL 896
Q+I IP+ + + LP R A L
Sbjct: 210 D--EWQVIGIPFKDKSAWFAIFLPTRRFALAENL 241
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 35.5 bits (78), Expect = 0.053
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYK-RXDYXYGXSAVLNAQLIEIPY 830
++IYFK W KFD S++DF + + K+ M + D + V + ++ + Y
Sbjct: 157 NSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFMKEFMNDRSFSSDDVFD--VLHVAY 214
Query: 831 XGDQSSLIVXLPKDRMAFXSEL 896
+ V LPK R + L
Sbjct: 215 SDQRYQFSVFLPKLRNSLKEAL 236
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 35.5 bits (78), Expect = 0.053
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 654 HAIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYK-RXDYXYGXSAVLNAQLIEIPY 830
++IYFK W KFD S++DF + + K+ M + D + V + ++ + Y
Sbjct: 157 NSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFMKEFMNDRSFSSDDVFD--VLHVAY 214
Query: 831 XGDQSSLIVXLPKDRMAFXSEL 896
+ V LPK R + L
Sbjct: 215 SDQRYQFSVFLPKLRNSLKEAL 236
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 657 AIYFKGAWSSKFDERLTSDRDFYVSXDKTIKVPMMYKRX-DYXYGXSAVLNAQLIEIPYX 833
A F+ W +KF + TS ++F+ + + + ++ + Y + Q++ +PY
Sbjct: 162 AACFEAQWQNKFHKLSTSKKEFFCTANSHRNIKFLHATGANRKYCENDKF--QVLSLPYT 219
Query: 834 GDQSSLIVXLPKDRMAFXSEL 896
+ + LPK++ L
Sbjct: 220 DSSFEMTIFLPKEQFGLAEAL 240
>Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical
protein C14B1.5 protein.
Length = 396
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = -2
Query: 303 KLKLTEREEAAPKMPERTMLFPWIIFHYFGKHSGCEVIV 187
K++ TE + A + PE +++ +I K++GC+ ++
Sbjct: 42 KIRSTESKYVALQFPEGLIMYACVIADILEKYTGCDTVI 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,433,561
Number of Sequences: 27780
Number of extensions: 355904
Number of successful extensions: 951
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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