Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J21
(965 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 38 0.009
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 38 0.009
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 38 0.012
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 38 0.012
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 38 0.012
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 37 0.021
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 35 0.11
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 35 0.11
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.20
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 33 0.46
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 30 2.4
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 2.4
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 3.2
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 30 3.2
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041) 29 4.3
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 29 7.5
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 29 7.5
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 28 9.9
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 28 9.9
SB_39389| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_5348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 38.3 bits (85), Expect = 0.009
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
P PPPP PPPPP G PPPPP + C PPP
Sbjct: 695 PPPPPPPPPLLSGTLPMPPPPPPPPP-------GCAGLPPPPPSPQPGCAGLPPPPPPPP 747
Score = 35.5 bits (78), Expect = 0.065
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
P PPPP PPPPP G PPPPPP
Sbjct: 677 PPPPPPLPVIEGSSLSVPPPPPPPPPP-LLSGTLPMPPPPPPP 718
Score = 31.9 bits (69), Expect = 0.80
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
PPPPP G PPPPPP PPP
Sbjct: 678 PPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPP 720
Score = 31.9 bits (69), Expect = 0.80
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPP PPPPP G PPPPPP
Sbjct: 727 PPPPSPQPGCAGLPPPPPPPPPGCAG--------LPPPPPP 759
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
PPPPP G PPPPPP PPP
Sbjct: 677 PPPPPPLPV--IEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPP 717
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 38.3 bits (85), Expect = 0.009
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
P PPPP PPPPP PPPPPP PPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 36.7 bits (81), Expect = 0.028
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
P PPPP PPPP + PPPPPP PPP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 35.5 bits (78), Expect = 0.065
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXC 781
P PPPP PPPPP PPPPPP + C
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP---PPPPPPPPPALRLAC 438
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 37.9 bits (84), Expect = 0.012
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
PPPP PPPP + GG PPPPPP ++ PPP
Sbjct: 341 PPPPPISKPPTSTRSAPPPPPGRAPQPLGG-----PPPPPPGRRPPSGKINPPPPPPP 393
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKK 772
PPPP PPPPP ++ G PPPPP K
Sbjct: 357 PPPPPGRAPQPLGGPPPPPPGRRP---PSGKINPPPPPPPAMDK 397
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPPP + G PPPPP
Sbjct: 194 PPPPPHSRHGSAPPPPERSSGPPPPP 219
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 37.9 bits (84), Expect = 0.012
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
PPPP PPPP + GG PPPPPP ++ PPP
Sbjct: 253 PPPPPISKPPTSTRSAPPPPPGRAPQPLGG-----PPPPPPGRRPPSGKINPPPPPPP 305
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKK 772
PPPP PPPPP ++ G PPPPP K
Sbjct: 269 PPPPPGRAPQPLGGPPPPPPGRRP---PSGKINPPPPPPPAMDK 309
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPPP + G PPPPP
Sbjct: 106 PPPPPHSRHGSAPPPPERSSGPPPPP 131
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPP 760
P PPPP PPPPP G GG PPPPP
Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPPPP------GDGGAPPPPPPP 337
Score = 35.1 bits (77), Expect = 0.086
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPP-----PPPXKKXGGXXGGGGXXXPPPPPP 763
P PPPP PP PPP G G PPPPPP
Sbjct: 290 PVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 625 GXXPXPXXPXXXXXXXXXXXPPPPPPXKXGG 717
G P P P PPPPPP GG
Sbjct: 299 GSAPAPPPPPPPGGAPPPPPPPPPPPPGDGG 329
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 37.1 bits (82), Expect = 0.021
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
P PPPP PPPP GG PPPPPP PPP
Sbjct: 920 PPPPPPPGGNAPLP---PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPP 976
Score = 36.3 bits (80), Expect = 0.037
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKK 772
P PPPP PP PP GG PPPPPP +K
Sbjct: 954 PPPPPPGGSAPPPGGGAPPLPPPP--GGSAPPPPPPPPPPPPPMRK 997
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXK 769
P PPPP PP P G PPPPP K
Sbjct: 953 PPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPPMRK 997
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 508 PPPPPPXXFFXPPXGGG 458
PPPPPP PP GGG
Sbjct: 953 PPPPPPPGGSAPPPGGG 969
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 37.1 bits (82), Expect = 0.021
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXG-----GGGXXXPPPPPP 763
P PPPP PPPPP G GGG PPPPPP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGG--APPPPPP 705
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXX--PPPPPXKKXGGXXGGGGXXXPPPPPP 763
P PPPP PPPP GG PPPPPP
Sbjct: 326 PPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPP 370
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPP 760
P PPPP PPPPP G G PPPPP
Sbjct: 363 PPPPPPPPVGG------PPPPPPPIEGRPPSSLGNPPPPPPP 398
Score = 32.7 bits (71), Expect = 0.46
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
P PP PPPPP GG PPPPPP + PPP
Sbjct: 346 PPPPSMGMAPPPVGGAAPPPPPPPPVGG--------PPPPPPPIEGRPPSSLGNPPPPPP 397
Score = 31.9 bits (69), Expect = 0.80
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGG--XXXPPPPPPXKKXXCXXXXXXXXP 808
P PPP PPPP + PPPPPP + P
Sbjct: 287 PPPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAP 346
Query: 809 PP 814
PP
Sbjct: 347 PP 348
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGG 730
P PPPP PPPPP G G
Sbjct: 375 PPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPG 406
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 647 PPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPP 760
PP PPPPP G G PPPPP
Sbjct: 269 PPIPSASQNATPPPPPPPPSNTPGMFASSGFQPPPPPP 306
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
PP P PPPPP G G PPPPPP
Sbjct: 269 PPIPSASQNATPPP-PPPPPSNTPGMFASSG--FQPPPPPP 306
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.20
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXX--PPPPPXKKXGGXXGGGGXXXPPPPPP 763
P PPPP PPPPP G PPPPPP
Sbjct: 355 PSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPP 399
Score = 33.9 bits (74), Expect = 0.20
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXX--PPPPPXKKXGGXXGGGGXXXPPPPPP 763
P PPPP PPPPP G PPPPPP
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
PPPPP PPPPP K PPP
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPP 388
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
P PPPP PPPPP PPPPPP
Sbjct: 374 PPPPPPPTNGP------PPPPPPTNGPPPPPPPTNGPPPPPPP 410
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKK 772
PPPP PPPPP + G PPPPPP ++
Sbjct: 50 PPPPPPPRFYDNDIPPPPPPRR-------GFYDDYPPPPPPPRR 86
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 32.7 bits (71), Expect = 0.46
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPPP G GG PPPPPP
Sbjct: 195 PPPPPPPPPPGFPGGA---PPPPPPP 217
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKK 772
PPPP PPPP + G G G PP P P K
Sbjct: 1254 PPPPGMRPMPPQPPFMPPPPRMQPPGPPGPPG---PPGPQPSNK 1294
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPPP GGG PPPPPP
Sbjct: 653 PPPPP---------GGGMFPPPPPPP 669
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPP PPPPP GG G P PPPP
Sbjct: 653 PPPPPGGGMF-----PPPPPPPPGGGVPG-----PPKPPPP 683
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPPP G G PPPPPP
Sbjct: 755 PPPPPPP---AVPGEGARPPPPPPPP 777
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +2
Query: 689 PPPPXKKXGGXXGGGGXXXPP--PPPPXKKXXCXXXXXXXXPPP 814
PP P G GGG PP PPPP PPP
Sbjct: 436 PPQPRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPP 479
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPP PPPP GG PPPPPP
Sbjct: 138 PPPPPPIAPATGGPPPPPPIAPATGG---------PPPPPP 169
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPP PPPPP PPPPPP
Sbjct: 111 PPPPRAPETPSQAPSPPPPPTSP--------ATRAPPPPPP 143
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPP P P GG PPPPPP
Sbjct: 164 PPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPP 204
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
P PPPP PPPPP PPPPPP
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPP------------PPFPPPPPP 494
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.9 bits (64), Expect = 3.2
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPP---PPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPP 811
PPPP PP PPP G G GG P PPP PP
Sbjct: 241 PPPPHSMPPPGMP--PPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPPGGMPPNMEQPPPP 298
Query: 812 P 814
P
Sbjct: 299 P 299
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 689 PPPPXKKXGGXXGGGGXXXPPPPPPXKK 772
PPPP PPPPPP KK
Sbjct: 225 PPPPAAPAPPPPPAAAPPPPPPPPPVKK 252
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPPP 814
P PPPP PPP P PP PPP PPP
Sbjct: 93 PYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPP 152
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPP-PPPXKKXGGXXGGGGXXXPPPPPPXKKXXCXXXXXXXXPP 811
P PPPP PP PPP PP PPP PP
Sbjct: 147 PYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPP 206
Query: 812 P 814
P
Sbjct: 207 P 207
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPP 757
P PPPP PPPP PPPP
Sbjct: 186 PYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGG 730
P PPP PPPPP G GG
Sbjct: 864 PRRPPPPPPPPPPPPPPPPPPPASSTGSTPGG 895
>SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPP 763
PP P G GG PPPPPP
Sbjct: 115 PPAPTSVPSGPRAPPGGPGAPPPPPP 140
>SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041)
Length = 154
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 762 GGGGGGXXXPPPPXXPPXFXXGGGGGXXXXXXXXXXXGGGGXG 634
GGGGGG GGGGG GGGG G
Sbjct: 72 GGGGGGGGGGGGDDGDGGGGDGGGGGGGGDGGGGGGGGGGGVG 114
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKK 709
P PPPP PPPPP K+
Sbjct: 212 PPPPPPEDDSIHNHEDLPPPPPPKE 236
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPP 763
P P P PPPPP + PPPPPP
Sbjct: 194 PEPTRPPPPLDDLDDLPPPPPPPPEDDSIH--NHEDLPPPPPP 234
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGGXXG---GGGXXXPPPPP 760
P PP P P PPP GG PPPPP
Sbjct: 162 PQPPAPPAAPFMAPAAPPAPPPPGAPAAPPAPPFGGPPSAPPPPP 206
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPP--PXKKXGGXXGGGGXXXPPPPPP 763
P PP PPPP P GG PPPP P
Sbjct: 164 PPAPPAAPFMAPAAPPAPPPPGAPAAPPAPPFGGPPSAPPPPPAP 208
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +2
Query: 635 PXPP-PPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXC 781
P PP PP PP G GG G PP PP + C
Sbjct: 892 PGPPGPPGPKGPPGPNGCLGPPGDAGPAGNTGGAGCQPAPPCPPACETVC 941
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 686 PPPPPXKKXGGXXGGGGXXXPPPPPPXKKXXC 781
PPPPP PPPPPP C
Sbjct: 555 PPPPPGVDIPPPLPPSEDPKPPPPPPEPPEEC 586
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPP 760
PPPP PPPP + G G G PPPP
Sbjct: 569 PPPPGAGQGG-----PPPPGAGQEGPPPPGAGQGGGPPPP 603
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 641 PPPPXXXXXXXXXXXPPPPPXKKXGGXXGGGGXXXPPPPPPXK 769
PPPP PP P + G PPPPPP K
Sbjct: 777 PPPPPPPTKPATPRVPPNIPSRPPGARP------TPPPPPPGK 813
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 689 PPPPXKKXGGXXGGGGXXXPPPPPP 763
PPPP K GG G PPP PP
Sbjct: 386 PPPPWSKPGGILPG----PPPPGPP 406
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 508 PPPPPPXXFFXPPXGGG 458
PPPPPP PP GG
Sbjct: 70 PPPPPPPPLPPPPPSGG 86
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 635 PXPPPPXXXXXXXXXXXPPPPPXKKXGG 718
P PPPP PPPP K GG
Sbjct: 1048 PFPPPPPPYQTGSPIRAFPPPPAVKFGG 1075
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 508 PPPPPPXXFFXPPXGGG 458
PPPPPP PP GG
Sbjct: 294 PPPPPPPPLPPPPPSGG 310
>SB_39389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -2
Query: 511 GPPPPPPXXFFXPP--XGGGGG 452
GP PPPP F P GGGGG
Sbjct: 127 GPTPPPPNPKFSIPFIRGGGGG 148
>SB_5348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 762 GGGGGGXXXPPPPXXP 715
GGG GG PPPP P
Sbjct: 136 GGGAGGTKRPPPPKRP 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,607,758
Number of Sequences: 59808
Number of extensions: 253767
Number of successful extensions: 4142
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2529
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2848211039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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