Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J19
(979 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 134 8e-32
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 132 5e-31
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 130 1e-30
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 101 7e-22
07_03_1358 - 25984897-25984997,25985623-25985650 44 2e-04
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 41 0.001
12_02_1155 + 26541137-26541142,26541244-26542623,26542730-265428... 30 3.2
04_04_0608 - 26585436-26585843,26585897-26586091,26586315-265863... 30 3.2
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 30 3.2
09_04_0629 - 19098087-19098516,19099120-19099370 29 5.6
07_03_0720 - 20926363-20926794 28 9.8
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 28 9.8
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 28 9.8
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 134 bits (325), Expect = 8e-32
Identities = 64/107 (59%), Positives = 81/107 (75%)
Frame = +1
Query: 91 LVHNSVPSVFSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARE 270
+VH S + K + PRRP+EK RLD LKL+GEYGLR KRE+WRV+Y L+RIR AR
Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARH 60
Query: 271 LLTLEEKDPKXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
LLTL+EK+P+ +FEG ALLRR+ R G+L + Q KLDYVL L +E+FL
Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFL 107
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 416 RRLQTQVFKAGLAKSIHHARILIRQRHIR 502
RRLQT VFKAG+AKSIHHAR+LIRQRHIR
Sbjct: 109 RRLQTLVFKAGMAKSIHHARVLIRQRHIR 137
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 132 bits (318), Expect = 5e-31
Identities = 61/98 (62%), Positives = 77/98 (78%)
Frame = +1
Query: 118 FSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 297
+ K + PRRP+EK RLD LKL+GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 298 KXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
+ +FEG ALLRR+ R G+L + Q KLDYVL L +E+FL
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFL 323
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 416 RRLQTQVFKAGLAKSIHHARILIRQRHIR 502
RRLQT VFKAG+AKSIHHAR+LIRQRHIR
Sbjct: 325 RRLQTLVFKAGMAKSIHHARVLIRQRHIR 353
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 130 bits (315), Expect = 1e-30
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +1
Query: 124 KPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKX 303
K + PRRP+EK RLD LKL+GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 304 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFL 130
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 416 RRLQTQVFKAGLAKSIHHARILIRQRHIR 502
RRLQT VFKAG+AKSIHHAR+LIRQRHIR
Sbjct: 132 RRLQTLVFKAGMAKSIHHARVLIRQRHIR 160
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 101 bits (243), Expect = 7e-22
Identities = 53/98 (54%), Positives = 67/98 (68%)
Frame = +1
Query: 118 FSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 297
+ K + PRRP+EK R D LKL GEYGLR+K E+WRV+ ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNP 58
Query: 298 KXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
+ +FEG ALLR + R G+L E Q KLDYVL L +E+FL
Sbjct: 59 RRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFL 96
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2
Query: 419 RLQTQVFKAGLAKSIHHARILIRQRHI 499
RLQT VFK G KSIHH +LIRQ HI
Sbjct: 99 RLQTIVFKNGTVKSIHHDHVLIRQHHI 125
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 91 LVHNSVPSVFSKPYVXPRRPFEKARLDQALKLIGEYG 201
+ H S + K + PRRP+EK RLD LKL+GEYG
Sbjct: 1 MAHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYG 37
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = -1
Query: 583 FNKVEV-QVVYMNKTDSGSSN*SATVISPNMPLPDQNSGMMDGLRQASF-EHLRLQTT-- 416
F KV+ V + D GS S + + P M LP QN+G+M+ ASF L+L +
Sbjct: 20 FLKVKAAHVKAKGRNDCGSWRKSGSRVDPPMVLPQQNAGLMEADGSASFIRKLQLSVSDG 79
Query: 415 LPRS---PQSSDQAHNRVSSVFHPVLQ 344
LP + P+ S Q H V SVF VLQ
Sbjct: 80 LPHAAPVPELSTQEHELVKSVFQ-VLQ 105
>12_02_1155 +
26541137-26541142,26541244-26542623,26542730-26542852,
26542996-26543168,26543332-26543572,26543931-26544023,
26544092-26544232,26544358-26544450,26544633-26544837,
26544993-26545078,26545532-26545620,26545736-26545820,
26545898-26545954,26546319-26546399,26547130-26547321
Length = 1014
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 322 LLRRLVRIGVLDEKQMKLDYVLGLKIEDFLGASSADAG--VQSW 447
L RL+R +L+ KQ+ LD+ G I G S +G + SW
Sbjct: 233 LKERLIRRRMLEHKQLTLDFSAGRVISSDTGGDSPGSGGKISSW 276
>04_04_0608 -
26585436-26585843,26585897-26586091,26586315-26586389,
26586682-26586742,26587179-26587213
Length = 257
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 271 LLTLEEKDPKXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLGASSADAGVQSWP 450
L T + KD F L R L L E+ +LD +LG+ + DF + A+ G WP
Sbjct: 121 LRTADTKDCMQFFTNEELKRELNDADSLSEE--RLDELLGMFVRDFEAGAVAERG---WP 175
Query: 451 GE 456
E
Sbjct: 176 TE 177
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 29.9 bits (64), Expect = 3.2
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = -1
Query: 496 MPLPDQNSGMMDGLRQASF-EHLRLQTT--LPRS---PQSSDQAHNRVSSVFHPVLQ 344
M LP N+G+M+ ASF L+L + LP + P+ S Q H V SVF VLQ
Sbjct: 1 MVLPQLNAGLMEADGSASFIRKLQLSVSDGLPHAAPVPELSTQEHELVKSVFE-VLQ 56
>09_04_0629 - 19098087-19098516,19099120-19099370
Length = 226
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -1
Query: 478 NSGMMDGLRQASFEHLRLQTTLPRSPQS 395
++G DGL +A HLR++T LPR+ ++
Sbjct: 130 SAGTGDGLEEARRWHLRVETELPRAAEA 157
>07_03_0720 - 20926363-20926794
Length = 143
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 406 FLGASSADAGVQSWPGEVHPSCQNFDPAKA-YSVR*Q----WRSNCCC 534
++G DAG +WPG V S D A A + R + WR + CC
Sbjct: 94 WIGGRGEDAGATAWPGLVQISGNGDDVAAAVHRARSRATMTWRRSRCC 141
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 415 ASSADAGVQSWPGEVHPSCQNFDPAKAYS 501
A+S G SW CQ++DPAK Y+
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYN 422
>03_02_0924 + 12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 484 DQNSGMMDGLRQASFEHLR---LQTTLPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHY 314
D S ++DGL + +FEH R + L + P S Q + S + ++ +E
Sbjct: 912 DGVSALLDGLDEETFEHHRSGLIADKLEKDPSLSYQTGDYWSQIVDKRYMFDMSKLEAEE 971
Query: 313 LRT 305
LRT
Sbjct: 972 LRT 974
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,821,553
Number of Sequences: 37544
Number of extensions: 289508
Number of successful extensions: 747
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2846681820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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