Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J19
         (979 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   188   1e-47
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   188   1e-47
AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   188   1e-47
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   188   1e-47
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   140   4e-33

>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  188 bits (457), Expect = 1e-47
 Identities = 89/107 (83%), Positives = 98/107 (91%)
 Frame = +1

Query: 91  LVHNSVPSVFSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARE 270
           +V+  +PSVFSK YV PRRP+EKARLDQ LK+IGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
           LLTL+EKD K LF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFL 107



 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 413 ERRLQTQVFKAGLAKSIHHARILIRQRHIR 502
           ERRLQTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 108 ERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  188 bits (457), Expect = 1e-47
 Identities = 89/107 (83%), Positives = 98/107 (91%)
 Frame = +1

Query: 91  LVHNSVPSVFSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARE 270
           +V+  +PSVFSK YV PRRP+EKARLDQ LK+IGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
           LLTL+EKD K LF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFL 107



 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 413 ERRLQTQVFKAGLAKSIHHARILIRQRHIR 502
           ERRLQTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 108 ERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  188 bits (457), Expect = 1e-47
 Identities = 89/107 (83%), Positives = 98/107 (91%)
 Frame = +1

Query: 91  LVHNSVPSVFSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARE 270
           +V+  +PSVFSK YV PRRP+EKARLDQ LK+IGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
           LLTL+EKD K LF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFL 107



 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 413 ERRLQTQVFKAGLAKSIHHARILIRQRHIR 502
           ERRLQTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 108 ERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  188 bits (457), Expect = 1e-47
 Identities = 89/107 (83%), Positives = 98/107 (91%)
 Frame = +1

Query: 91  LVHNSVPSVFSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARE 270
           +V+  +PSVFSK YV PRRP+EKARLDQ LK+IGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFL 411
           LLTL+EKD K LF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFL 107



 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 413 ERRLQTQVFKAGLAKSIHHARILIRQRHIR 502
           ERRLQTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 108 ERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  140 bits (338), Expect = 4e-33
 Identities = 74/118 (62%), Positives = 89/118 (75%)
 Frame = +1

Query: 91  LVHNSVPSVFSKPYVXPRRPFEKARLDQALKLIGEYGLRNKREVWRVKYTLARIRKAARE 270
           +V+  +PSVFSK YV PRRP+EKARLDQ LK+IGEYGL+  R V  VKY LA+IRK ARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARE 59

Query: 271 LLTLEEKDPKXLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLGASSADAGVQS 444
           LLTL+EKD K LF+G +L+RRLVRIGVL +   +     G +    LGASSADAGVQ+
Sbjct: 60  LLTLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQA 116



 Score = 37.5 bits (83), Expect = 0.028
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 440 KAGLAKSIHHARILIRQR 493
           +AGLAKSIHHAR+LIRQR
Sbjct: 115 QAGLAKSIHHARVLIRQR 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,518,164
Number of Sequences: 53049
Number of extensions: 481369
Number of successful extensions: 1403
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4915008720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)