Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J19
         (979 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   1.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   5.6  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -3

Query: 233 LTRHTSRLLRRPYSPMSFNAWSRRAFSKGRRGXTYGFENTDGTLLCTSLASAHALRADKN 54
           +T  +SR  ++   P+S N    R    G     Y  EN  G+ LC  +     L  +KN
Sbjct: 90  ITEDSSR--KQTIDPLSSNTQITRKRRVGIVENQYAVENNTGSSLCDLVQGLERLFDEKN 147


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 642 AGHISTTPLYENTNCFKTLNSTK 574
           A +ISTT +YEN NC    +S +
Sbjct: 632 AFNISTT-IYENQNCLDASSSRR 653


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,885
Number of Sequences: 438
Number of extensions: 2947
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32290713
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)