Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J18
         (955 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1I906 Cluster: Putative uncharacterized protein precur...    33   8.1  
UniRef50_A0GBU1 Cluster: Transcriptional regulator, GntR family;...    33   8.1  
UniRef50_A6SB69 Cluster: Putative uncharacterized protein; n=2; ...    33   8.1  

>UniRef50_A1I906 Cluster: Putative uncharacterized protein
           precursor; n=1; Candidatus Desulfococcus oleovorans
           Hxd3|Rep: Putative uncharacterized protein precursor -
           Candidatus Desulfococcus oleovorans Hxd3
          Length = 1292

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +1

Query: 199 SMTPNPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGPTLLQ 378
           S  P+  F  PT+ N  +P+D  PY++   KD + N +G  P+  G        G ++ +
Sbjct: 806 STCPDSDFT-PTIWNDNKPLDGIPYLIFWQKDQSTNADG-SPLSTGC-------GGSVSE 856

Query: 379 AY-PFPWCS 402
            Y PF W S
Sbjct: 857 GYSPFEWLS 865


>UniRef50_A0GBU1 Cluster: Transcriptional regulator, GntR family;
           n=2; Burkholderiales|Rep: Transcriptional regulator,
           GntR family - Burkholderia phytofirmans PsJN
          Length = 483

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 287 PKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGARGGK 412
           PKT  + +    +  T+  T TVP G  +  P  FP AR GK
Sbjct: 86  PKTVNVSDLVFEVLKTIRQTETVPLGSAFLSPALFPMARVGK 127


>UniRef50_A6SB69 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 1176

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
 Frame = +1

Query: 85  HSCSSQN-AILHAFRPRSAGSGQRSSPRLGSWKTPTQLXSM-TPNPFFAQPTVGNGYEPI 258
           H+ ++QN +      PRS     R SP L     P    +   P P F     G  Y P 
Sbjct: 78  HAANAQNWSPAQLLNPRSINQNSRPSPSLSPHPQPKFTPAAPAPQPLFQFDAPGGSYTP- 136

Query: 259 DNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQG 363
                  +PP + N N N Y    NG      P G
Sbjct: 137 -------SPPANPNYNVNSYSNGQNGFASYANPSG 164


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,964,574
Number of Sequences: 1657284
Number of extensions: 12506895
Number of successful extensions: 28615
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28531
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)