Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J18
         (955 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075549-1|AAL68356.1|  494|Drosophila melanogaster RH50269p pro...    31   3.1  
AE014134-2849|AAF53614.1|  494|Drosophila melanogaster CG6639-PA...    31   3.1  
AY095099-1|AAM11427.1|  984|Drosophila melanogaster SD09402p pro...    29   9.4  
AE014296-288|AAF47514.1|  985|Drosophila melanogaster CG7879-PB,...    29   9.4  
AE014296-287|AAF47513.1|  985|Drosophila melanogaster CG7879-PA,...    29   9.4  

>AY075549-1|AAL68356.1|  494|Drosophila melanogaster RH50269p
           protein.
          Length = 494

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 235 VGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGPTLLQAYP 387
           V NG  P++N  Y  N    Y  N  GY P++NG Y V+    P     YP
Sbjct: 136 VNNGGYPVNNGGYPSNNG-GYPSNNGGY-PVNNGGYPVNNGGYPANNGGYP 184


>AE014134-2849|AAF53614.1|  494|Drosophila melanogaster CG6639-PA
           protein.
          Length = 494

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 235 VGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGPTLLQAYP 387
           V NG  P++N  Y  N    Y  N  GY P++NG Y V+    P     YP
Sbjct: 136 VNNGGYPVNNGGYPSNNG-GYPSNNGGY-PVNNGGYPVNNGGYPANNGGYP 184


>AY095099-1|AAM11427.1|  984|Drosophila melanogaster SD09402p
           protein.
          Length = 984

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 214 PFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNG---YEPIDN-GAYYVDRPQ 360
           PF   P   NG   ++N P+ +N   +YN N NG     P DN GA  + RP+
Sbjct: 646 PFHMPPLQQNG---VNNFPFNMNNNYNYNGNSNGNGPNYPNDNGGAGVIQRPR 695


>AE014296-288|AAF47514.1|  985|Drosophila melanogaster CG7879-PB,
           isoform B protein.
          Length = 985

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 214 PFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNG---YEPIDN-GAYYVDRPQ 360
           PF   P   NG   ++N P+ +N   +YN N NG     P DN GA  + RP+
Sbjct: 647 PFHMPPLQQNG---VNNFPFNMNNNYNYNGNSNGNGPNYPNDNGGAGVIQRPR 696


>AE014296-287|AAF47513.1|  985|Drosophila melanogaster CG7879-PA,
           isoform A protein.
          Length = 985

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 214 PFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNG---YEPIDN-GAYYVDRPQ 360
           PF   P   NG   ++N P+ +N   +YN N NG     P DN GA  + RP+
Sbjct: 647 PFHMPPLQQNG---VNNFPFNMNNNYNYNGNSNGNGPNYPNDNGGAGVIQRPR 696


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,516,461
Number of Sequences: 53049
Number of extensions: 618774
Number of successful extensions: 1656
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)