Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J14
         (935 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2GRP3 Cluster: Putative uncharacterized protein; n=1; ...    38   0.28 
UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    34   4.5  
UniRef50_Q9FXE0 Cluster: F12A21.10; n=1; Arabidopsis thaliana|Re...    34   4.5  

>UniRef50_Q2GRP3 Cluster: Putative uncharacterized protein; n=1;
            Chaetomium globosum|Rep: Putative uncharacterized protein
            - Chaetomium globosum (Soil fungus)
          Length = 1611

 Score = 38.3 bits (85), Expect = 0.28
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -2

Query: 619  PPPXPPPXFFFXXXXXXXXPPPPPXTXXXXF 527
            PPP PPP FF         PPPPP T    F
Sbjct: 1454 PPPTPPPHFFLNLPTTSPPPPPPPSTPPWGF 1484


>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
 Frame = -2

Query: 649 FFFFXXXXXXPPPXPPPXFFFXXXXXXXXPPPPPXT--XXXXFXXXXXXXXFXXXLXGGG 476
           FFFF      PPP       F        PPPPP T      F        F     GGG
Sbjct: 56  FFFFPHFFFPPPPRRGGGGVFFYKKKRGGPPPPPTTQKKKNFFFSPPPPPSFWGXFFGGG 115

Query: 475 GXLXIFXFWXXDPTPP 428
           G           P PP
Sbjct: 116 GGFVXXPPRGGAPPPP 131


>UniRef50_Q9FXE0 Cluster: F12A21.10; n=1; Arabidopsis thaliana|Rep:
           F12A21.10 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 527

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 643 FFXXXXXXPPPXPPPXFFFXXXXXXXXPPPP 551
           FF      PPP PPP  +F        PPPP
Sbjct: 39  FFLPHPPPPPPPPPPPLYFSYFSLPPPPPPP 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.151    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,634,974
Number of Sequences: 1657284
Number of extensions: 6957623
Number of successful extensions: 8494
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7603
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 85732778670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)