Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J14
(935 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 33 0.33
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 31 1.00
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 31 1.00
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 31 1.7
03_02_0122 - 5742530-5743705 30 2.3
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 30 3.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.0
09_02_0603 - 11150739-11150746,11150791-11151340 29 5.3
03_03_0139 + 14769393-14769764,14770113-14770193,14770537-14770737 29 5.3
03_01_0515 - 3864796-3865425 29 5.3
07_03_0890 - 22332768-22333382 29 7.0
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 7.0
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 28 9.3
06_03_1172 - 28147957-28148274,28149362-28149877 28 9.3
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 33.1 bits (72), Expect = 0.33
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP ++ PPPPP
Sbjct: 359 PPPPPPPPVYYSSYVMLDRPPPPP 382
Score = 32.7 bits (71), Expect = 0.43
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP ++ PPPPP
Sbjct: 360 PPPPPPPVYYSSYVMLDRPPPPPP 383
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP F PPPPP
Sbjct: 331 PPPPPPPPSRFNNTTPKPPPPPPP 354
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP F PPPPP
Sbjct: 332 PPPPPPPSRFNNTTPKPPPPPPPP 355
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 403 PPPXXXXRGGGWGPFXKNXKXXXXPPPP 486
PPP RGGG + + K PPPP
Sbjct: 14 PPPPPFGRGGGGAGYPRGHKQLYAPPPP 41
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP PPPPP
Sbjct: 111 PPPPPPPHLLHYYGHPPPPPPPPP 134
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PP + PPPPP
Sbjct: 112 PPPPPPHLLHYYGHPPPPPPPPPP 135
>03_02_0122 - 5742530-5743705
Length = 391
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 549 GGGGGXXXXXXXXKKKXGGGXGGGXXXXXKKKKKK 653
GG GG KKK GGG GGG + KK
Sbjct: 240 GGYGGGGRYEDEYKKKPGGGHGGGRYEEDDEYNKK 274
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 549 GGGGGXXXXXXXXKKKXGGGXGGG 620
GGGGG KK GGG GGG
Sbjct: 209 GGGGGGGGGGKKKGKKGGGGGGGG 232
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP PPPPP
Sbjct: 602 PPPPPPPPPILPNRSVPPPPPPPP 625
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP PPPPP
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPP 626
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 616 PPXPPPXFFFXXXXXXXXPPPPP 548
PP PPP F PPPPP
Sbjct: 44 PPPPPPGSTFVPLPQSGVPPPPP 66
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 616 PPXPPPXFFFXXXXXXXXPPPPP 548
PP PP FF PPPPP
Sbjct: 62 PPPPPLGSFFVPPPQSRVPPPPP 84
>03_03_0139 + 14769393-14769764,14770113-14770193,14770537-14770737
Length = 217
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 549 GGGGGXXXXXXXXKKKXGGGXGGG 620
GGGGG +K GGG GGG
Sbjct: 5 GGGGGGGGIAGKKRKAVGGGGGGG 28
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP PPPPP
Sbjct: 71 PPPPPPPSVTSSPPPPPLPPPPPP 94
>07_03_0890 - 22332768-22333382
Length = 204
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP PPPPP
Sbjct: 87 PPPPPPPERAVPEAADTPPPPPPP 110
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPP 548
PPP PPP PPPPP
Sbjct: 358 PPPPPPPPKLNTAPKPPPPPPPPP 381
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPP-PPPXT 542
PPP PPP FF P PPP T
Sbjct: 56 PPPPPPPAPFFPFLPDSAPPQLPPPVT 82
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 619 PPPXPPPXFFFXXXXXXXXPPPPPXT 542
PPP PP + F PPPP T
Sbjct: 14 PPPSPPSVYPFLPPATFIPPPPPAAT 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.151 0.506
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,985
Number of Sequences: 37544
Number of extensions: 364875
Number of successful extensions: 1257
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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