Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J13
(969 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 29 4.2
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 29 5.6
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 28 9.7
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 28 9.7
02_04_0103 - 19768288-19768737 28 9.7
02_01_0475 + 3422629-3422695,3422960-3423216 28 9.7
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 742 FFFFFFFXXXPXPPXPXXXFFFFFFFF 662
FFFFFFF FFFFFFFF
Sbjct: 87 FFFFFFFFFF------FFFFFFFFFFF 107
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 74 KKKKKKKKKKKKKKKNKKKKKKKKKKK 100
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 75 KKKKKKKKKKKKKKNKKKKKKKKKKKK 101
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 76 KKKKKKKKKKKKKNKKKKKKKKKKKKK 102
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 70 KKKKKKKKKKKKKKKKKKKNKKKKKKK 96
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 71 KKKKKKKKKKKKKKKKKKNKKKKKKKK 97
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 72 KKKKKKKKKKKKKKKKKNKKKKKKKKK 98
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 73 KKKKKKKKKKKKKKKKNKKKKKKKKKK 99
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 77 KKKKKKKKKKKKNKKKKKKKKKKKKKK 103
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 78 KKKKKKKKKKKNKKKKKKKKKKKKKKK 104
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 79 KKKKKKKKKKNKKKKKKKKKKKKKKKK 105
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 80 KKKKKKKKKNKKKKKKKKKKKKKKKKK 106
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 81 KKKKKKKKNKKKKKKKKKKKKKKKKKK 107
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 28 KKKKKKKKKKKKKKKKKKKKKKKKKKK 54
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 29 KKKKKKKKKKKKKKKKKKKKKKKKKKK 55
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 30 KKKKKKKKKKKKKKKKKKKKKKKKKKK 56
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 373 KKKKKKKKKKKKKKKKKKKKKKKKKKK 399
>02_04_0103 - 19768288-19768737
Length = 149
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 113 KKKKKKKKKKKKKKKKKKKKKKKKKKK 139
>02_01_0475 + 3422629-3422695,3422960-3423216
Length = 107
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 43 KKKKKKKKKKKKKKKKKKKKKKKKKKK 69
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 44 KKKKKKKKKKKKKKKKKKKKKKKKKKK 70
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 662 KKKKKKKKXXXXXGGGXXXXKKKKKKK 742
KKKKKKKK KKKKKKK
Sbjct: 45 KKKKKKKKKKKKKKKKKKKKKKKKKKK 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,266,746
Number of Sequences: 37544
Number of extensions: 131682
Number of successful extensions: 758
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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