SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J13
         (969 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    33   1.6  

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 22  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKK 77



 Score = 33.1 bits (72), Expect = 1.6
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 23  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78



 Score = 33.1 bits (72), Expect = 1.6
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 24  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKK 79



 Score = 32.3 bits (70), Expect = 2.7
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 2   KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 57



 Score = 32.3 bits (70), Expect = 2.7
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 3   KKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 58



 Score = 32.3 bits (70), Expect = 2.7
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 4   KKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 59



 Score = 32.3 bits (70), Expect = 2.7
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 5   KKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60



 Score = 32.3 bits (70), Expect = 2.7
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 6   KKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61



 Score = 32.3 bits (70), Expect = 2.7
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 25  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 80



 Score = 32.3 bits (70), Expect = 2.7
 Identities = 23/56 (41%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKKK
Sbjct: 26  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKK 81



 Score = 31.1 bits (67), Expect = 6.3
 Identities = 22/56 (39%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKKK+
Sbjct: 27  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKR 82



 Score = 31.1 bits (67), Expect = 6.3
 Identities = 22/56 (39%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKKK+K
Sbjct: 28  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRK 83



 Score = 31.1 bits (67), Expect = 6.3
 Identities = 22/56 (39%), Positives = 23/56 (41%)
 Frame = +2

Query: 575 KKKKKXXGXFFFXXXKKXXKXFXXXXXXXKKKKKKKKXXXXXGGGXXXXKKKKKKK 742
           KKKKK          KK  K         KKKKKKKK            KKKK+KK
Sbjct: 29  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKK 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,526,592
Number of Sequences: 237096
Number of extensions: 734672
Number of successful extensions: 1957
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12880737904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -