Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J12
         (908 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   4.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 242 FLHKWRRSSSTWTSHN 289
           F  +WR++ + W +HN
Sbjct: 652 FFPRWRQTLAMWLNHN 667


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 132 NQTVSVITSDGRNFIGT 182
           N T+SVI++DG +F  T
Sbjct: 300 NHTLSVISTDGSDFNAT 316


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 202 VWSKPLRVPIKLRPSEVITDT 140
           +W KP+ + +  R S +I  T
Sbjct: 77  IWPKPVHIKLTNRESSIIDKT 97


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +1

Query: 556 KKCFICXICDAIALFVTIISCIXSXHXXXIHFMF 657
           K C +C   + I  F+ II C+   +     F +
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFNTIVFAFCY 555


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,759
Number of Sequences: 336
Number of extensions: 2880
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)