Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J11
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 87 2e-17
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 73 2e-13
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 73 2e-13
07_01_1001 - 8460467-8460799 64 2e-10
07_03_0321 + 16757414-16757743 63 3e-10
01_06_0098 - 26416768-26416998 31 0.92
08_02_1093 - 24271826-24273427 30 2.8
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119... 30 2.8
12_02_1217 + 27082452-27083593,27085041-27085158 29 3.7
11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877 29 4.9
12_01_0140 - 1088400-1088843 29 6.5
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/66 (57%), Positives = 56/66 (84%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 279
M+ +AAYLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60
Query: 280 KLSSMP 297
K +S+P
Sbjct: 61 KFASVP 66
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/67 (46%), Positives = 50/67 (74%)
Frame = +1
Query: 97 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 276
+M++++AYLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252
Query: 277 EKLSSMP 297
EK +S+P
Sbjct: 253 EKFASVP 259
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 73.3 bits (172), Expect = 2e-13
Identities = 30/66 (45%), Positives = 50/66 (75%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 279
M++++AYL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GRE
Sbjct: 1 MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60
Query: 280 KLSSMP 297
K +S+P
Sbjct: 61 KFASVP 66
>07_01_1001 - 8460467-8460799
Length = 110
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 279
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60
Query: 280 KLS 288
L+
Sbjct: 61 MLA 63
>07_03_0321 + 16757414-16757743
Length = 109
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 279
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60
Query: 280 KLS 288
L+
Sbjct: 61 MLA 63
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 151 PAAADVEKILSSVGIEADGEKLKKVITELNGKD 249
P V KI+ +V IEAD + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>08_02_1093 - 24271826-24273427
Length = 533
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 97 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 276
+ R AA +AV G+TT AAA + SS G + ++ + L +D +A R
Sbjct: 3 RKREAAAAAVAVADGETTTAAARADSSSSSEGGSVCDDVVRNIFARLPARDAVASMALSR 62
>08_01_0152 -
1190358-1190462,1190648-1190765,1191134-1192691,
1193338-1193530
Length = 657
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 9 HTIHYRESLR---I*RRTLFFRHYTFRVN*DLKNALRGRVFTGCAGWQDHASCR*R*EDP 179
H H +E ++ I + + HY ++V K+ GRV T A WQD + R P
Sbjct: 483 HHFHLKEGMKYVNIGQGMMLINHYKYQVWEVFKDKFSGRVATYVADWQDEENVGSRDRAP 542
Query: 180 QL 185
L
Sbjct: 543 GL 544
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 118 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKL 216
Y+LA+ TPA +D E+ VG +ADG+ L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877
Length = 258
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 142 KTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIA 267
KTT E +L+ + DG+K KKV+ L ++VE+L++
Sbjct: 137 KTTTEDDHEEVLLAYRSRKEDGKKRKKVVRRLGKEEVERLLS 178
>12_01_0140 - 1088400-1088843
Length = 147
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 142 KTTPAAADVEKILSSVGI--EADGEKLKKVITELNGKDVEQLIA 267
KTT D E++L + + DG+K KKV+ L ++VE+L++
Sbjct: 25 KTTTTEDDHEEVLLAYRPREKEDGKKRKKVVRRLGKEEVERLLS 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,136,464
Number of Sequences: 37544
Number of extensions: 222689
Number of successful extensions: 534
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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