Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J10
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519...    54   2e-07
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155...    54   2e-07
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973...    54   2e-07
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581...    52   8e-07
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399...    52   8e-07
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087...    52   8e-07
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046...    52   8e-07
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561     36   0.031

>07_03_0646 +
           20250684-20250686,20251522-20251701,20251899-20251973,
           20252072-20252131
          Length = 105

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
 Frame = +2

Query: 86  MVXVPKQRRTYXXXXXXXXXXXGITVQKVQGK-ARCPXXEXVMIVNSRGYGGQSKPIFXX 262
           MV VPK ++TY               Q  +GK +     +        GYGGQ+KP+F  
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 263 XXXXXXXIVLRS*VC*LQG*DH--RVALKRCKHFELGGDKKRKG 388
                  IVL+   C  Q   H  +  +KRCKHFE+GGDKK KG
Sbjct: 61  KAKTTKKIVLKL-QC--QSCKHYSQHPIKRCKHFEIGGDKKGKG 101


>07_03_0641 +
           20214245-20214247,20215086-20215265,20215463-20215537,
           20215636-20215695
          Length = 105

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
 Frame = +2

Query: 86  MVXVPKQRRTYXXXXXXXXXXXGITVQKVQGK-ARCPXXEXVMIVNSRGYGGQSKPIFXX 262
           MV VPK ++TY               Q  +GK +     +        GYGGQ+KP+F  
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 263 XXXXXXXIVLRS*VC*LQG*DH--RVALKRCKHFELGGDKKRKG 388
                  IVL+   C  Q   H  +  +KRCKHFE+GGDKK KG
Sbjct: 61  KAKTTKKIVLKL-QC--QSCKHYSQHPIKRCKHFEIGGDKKGKG 101


>07_03_0226 +
           15395380-15395382,15396993-15397172,15397286-15397360,
           15397466-15397525
          Length = 105

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
 Frame = +2

Query: 86  MVXVPKQRRTYXXXXXXXXXXXGITVQKVQGK-ARCPXXEXVMIVNSRGYGGQSKPIFXX 262
           MV VPK ++TY               Q  +GK +     +        GYGGQ+KP+F  
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 263 XXXXXXXIVLRS*VC*LQG*DH--RVALKRCKHFELGGDKKRKG 388
                  IVL+   C  Q   H  +  +KRCKHFE+GGDKK KG
Sbjct: 61  KAKTTKKIVLKL-QC--QSCKHYSQHPIKRCKHFEIGGDKKGKG 101


>07_03_0648 +
           20257442-20257528,20257688-20257867,20258055-20258129,
           20258230-20258289
          Length = 133

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +2

Query: 89  VXVPKQRRTYXXXXXXXXXXXGITVQKVQGK-ARCPXXEXVMIVNSRGYGGQSKPIFXXX 265
           V VPK ++TY               Q  +GK +     +        GYGGQ+KP+F   
Sbjct: 30  VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89

Query: 266 XXXXXXIVLRS*VC*LQG*DH--RVALKRCKHFELGGDKKRKG 388
                 IVL+   C  Q   H  +  +KRCKHFE+GGDKK KG
Sbjct: 90  AKTTKKIVLKL-QC--QSCKHYSQHPIKRCKHFEIGGDKKGKG 129


>07_03_0643 +
           20239224-20239310,20239470-20239649,20239837-20239911,
           20240012-20240071
          Length = 133

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +2

Query: 89  VXVPKQRRTYXXXXXXXXXXXGITVQKVQGK-ARCPXXEXVMIVNSRGYGGQSKPIFXXX 265
           V VPK ++TY               Q  +GK +     +        GYGGQ+KP+F   
Sbjct: 30  VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89

Query: 266 XXXXXXIVLRS*VC*LQG*DH--RVALKRCKHFELGGDKKRKG 388
                 IVL+   C  Q   H  +  +KRCKHFE+GGDKK KG
Sbjct: 90  AKTTKKIVLKL-QC--QSCKHYSQHPIKRCKHFEIGGDKKGKG 129


>07_03_0640 +
           20207497-20207554,20208457-20208482,20208522-20208701,
           20208891-20208965,20209062-20209121
          Length = 132

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +2

Query: 89  VXVPKQRRTYXXXXXXXXXXXGITVQKVQGK-ARCPXXEXVMIVNSRGYGGQSKPIFXXX 265
           V VPK ++TY               Q  +GK +     +        GYGGQ+KP+F   
Sbjct: 29  VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88

Query: 266 XXXXXXIVLRS*VC*LQG*DH--RVALKRCKHFELGGDKKRKG 388
                 IVL+   C  Q   H  +  +KRCKHFE+GGDKK KG
Sbjct: 89  AKTTKKIVLKL-QC--QSCKHYSQHPIKRCKHFEIGGDKKGKG 128


>07_03_0639 +
           20203902-20203988,20204152-20204331,20204529-20204603,
           20204696-20204755
          Length = 133

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +2

Query: 89  VXVPKQRRTYXXXXXXXXXXXGITVQKVQGK-ARCPXXEXVMIVNSRGYGGQSKPIFXXX 265
           V VPK ++TY               Q  +GK +     +        GYGGQ+KP+F   
Sbjct: 30  VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89

Query: 266 XXXXXXIVLRS*VC*LQG*DH--RVALKRCKHFELGGDKKRKG 388
                 IVL+   C  Q   H  +  +KRCKHFE+GGDKK KG
Sbjct: 90  AKTTKKIVLKL-QC--QSCKHYSQHPIKRCKHFEIGGDKKGKG 129


>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
          Length = 62

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +2

Query: 338 LKRCKHFELGGDKKRKG 388
           +KRCKHF++GGDKK KG
Sbjct: 42  IKRCKHFKIGGDKKGKG 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,939,187
Number of Sequences: 37544
Number of extensions: 233982
Number of successful extensions: 529
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)