Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J10
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   8.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = -1

Query: 346 SLQCNPVISPLQSAHSRPEHNFLSGFCLLFEDGFGLTTVTPAVYDHN 206
           +L   P +SP+      P H   +   ++ + G  +T V P V   N
Sbjct: 199 TLSVEPKVSPMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGN 245


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = -1

Query: 346 SLQCNPVISPLQSAHSRPEHNFLSGFCLLFEDGFGLTTVTPAVYDHN 206
           +L   P +SP+      P H   +   ++ + G  +T V P V   N
Sbjct: 199 TLSVEPKVSPMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGN 245


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +3

Query: 54  LFDIVPNXT---QKWXTYQNSAGRTAKNVNATKY 146
           + D+VPN T    KW  +Q S   T  N N  KY
Sbjct: 115 ILDLVPNHTSDQHKW--FQMSINNTNNN-NTNKY 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,811
Number of Sequences: 438
Number of extensions: 2481
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)