Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J09
         (950 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FNQ6 Cluster: XYPPX repeat family protein; n=1; Trich...    35   3.5  
UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap...    34   4.6  

>UniRef50_A2FNQ6 Cluster: XYPPX repeat family protein; n=1;
           Trichomonas vaginalis G3|Rep: XYPPX repeat family
           protein - Trichomonas vaginalis G3
          Length = 238

 Score = 34.7 bits (76), Expect = 3.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 757 PXGGXXPPSPXFFXPXGSFPPXGXPP 834
           P  G  PP+P  + P G +PP G PP
Sbjct: 177 PPQGAYPPAPGAYPPQGGYPPQGYPP 202


>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 757

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 16/34 (47%), Positives = 16/34 (47%)
 Frame = -1

Query: 848 GGGXRGGXPXGGKDPXGXKXXGEGGXXPPXGXLG 747
           GGG  GG P GG    G    G GG  PP G  G
Sbjct: 357 GGGGGGGPPEGGGGSDGAPGRGGGGGGPPGGGGG 390


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,233,986
Number of Sequences: 1657284
Number of extensions: 3816309
Number of successful extensions: 9436
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8675
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 87774035305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)