Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J05
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    26   1.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   5.1  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 325 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSG 441
           SDG    +   +KT RLW        RR+  +  D++ G
Sbjct: 404 SDGKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMDG 442


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 100 FSKMSETLKLRGTLRGHNGWVTQ 168
           F K+ E  ++   LRG+  W+TQ
Sbjct: 396 FQKLREKQQIEEDLRGYLDWITQ 418


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -3

Query: 483 ENPDTI*RLSTEKATREYILSMVLESSGSLACSEIPQTQSLVPRTGKGVITV 328
           E+PD+I  +S  K   +Y  ++      +L C  + +   L   TG   +T+
Sbjct: 603 EDPDSIPMISKLKYEEQYDKALRYIFGKTLICRNLERATELAKSTGLDCVTL 654


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 959,191
Number of Sequences: 2352
Number of extensions: 20012
Number of successful extensions: 72
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)