Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J04
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   4.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   4.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   4.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   4.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.5  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   9.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.5  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 326 KSSCGIYTGIHALFSKGDFRSIEGVPLAKI 415
           K  C +YT IH LF    F  +    L ++
Sbjct: 11  KDPCDVYTAIHPLFYVCTFFGLAPYSLVRV 40


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 326 KSSCGIYTGIHALFSKGDFRSIEGVPLAKI 415
           K  C +YT IH LF    F  +    L ++
Sbjct: 11  KDPCDVYTAIHPLFYVCTFFGLAPYSLVRV 40


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -1

Query: 147  WPTTEQIRIKYKNETLXSPLARLTTTN*PKTQKSVREXPXV 25
            W TT   R      T  S   R TTTN P TQ +    P V
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWP-TQGTTIPPPAV 1091


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = -2

Query: 518  ISAINIGEVSIQGTSGYNFRHLQHYLVHNRPNHEEFLPVELLQLNGSLLSRITHE 354
            +S  N GE S    + Y    + H L+ N P H   + +     N        HE
Sbjct: 1366 VSRNNAGEYSCHVENDYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLTFKLKPHE 1420


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ K+L
Sbjct: 190 YTRYQTLELEKEFHFNKYL 208


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 353 IHALFSKGDFRSIEGVPLAKIPHDWADYEP 442
           +HAL  K + R  E    A  P+   +Y+P
Sbjct: 430 LHALSDKPELRPFEPAVTAVQPYQDQEYQP 459


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ K+L
Sbjct: 190 YTRYQTLELEKEFHFNKYL 208


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ K+L
Sbjct: 190 YTRYQTLELEKEFHFNKYL 208


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 624 NNFPSLC*EYIHC 586
           N+ PS+C E+ HC
Sbjct: 32  NSAPSICGEHGHC 44


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 227 YTRYQTLELEKEFHFNRYL 245


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 227 YTRYQTLELEKEFHFNRYL 245


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 249 YTRYQTLELEKEFHFNRYL 267


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 227 YTRYQTLELEKEFHFNRYL 245


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 227 YTRYQTLELEKEFHFNRYL 245


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 183 YTRYQTLELEKEFHFNRYL 201


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 227 YTRYQTLELEKEFHFNRYL 245


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 15  YTRYQTLELEKEFHFNRYL 33


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 251 YTRYQTLELEKEFHFNRYL 269


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 YSRKETSVQLKEFHWQKFL 419
           Y+R +T    KEFH+ ++L
Sbjct: 227 YTRYQTLELEKEFHFNRYL 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,815
Number of Sequences: 336
Number of extensions: 4066
Number of successful extensions: 31
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)