Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J04
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   3.0  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    24   6.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   6.9  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 14/56 (25%), Positives = 22/56 (39%)
 Frame = -2

Query: 503  IGEVSIQGTSGYNFRHLQHYLVHNRPNHEEFLPVELLQLNGSLLSRITHEYQCRCH 336
            +G + IQ         L+ Y V ++  HE +  V       S L     +YQ  C+
Sbjct: 885  VGIIDIQALCISQIHQLRSYFVESQNRHELYRTVYKADHGLSALHLAQQDYQLNCN 940


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 338 GIYTGIHALFSKGDFRSIEGVPLAK 412
           G   G+  +  +G F   EG PLAK
Sbjct: 136 GYLAGVPVMCMQGRFHHYEGYPLAK 160


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 254  EGSVLASPLDAALKSSMLSLITNKKSSCGIYTGIHALFSKGDFRSIEGVPLAKIPHDWAD 433
            +G   A  +    KSS+LS    + S CG+  G     + G+  S + + L       A 
Sbjct: 1077 DGGDAARDVRERRKSSLLSTQEREGSHCGVSGGGSISLAVGNSDSSQ-LSLVNGKGSEAT 1135

Query: 434  YEP-DNAGGDE 463
              P DNAGG E
Sbjct: 1136 TAPSDNAGGAE 1146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,642
Number of Sequences: 2352
Number of extensions: 17906
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)