Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J02
(900 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 47 6e-04
UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila m... 44 0.005
UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31; Eukary... 44 0.007
UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal ... 42 0.021
UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66; Eukary... 42 0.021
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 39 0.20
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.46
UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4; Eukaryo... 37 0.61
UniRef50_P90983 Cluster: Ribosomal protein, small subunit protei... 35 3.3
UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal ... 34 4.3
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 33 7.5
UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n... 33 7.5
UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=... 33 9.9
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 47.2 bits (107), Expect = 6e-04
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = +2
Query: 578 INKLTTTIAFILCXRFRGRCGXVFSALMNRPTRGERRFXYWXLXRFL 718
+++LT L RF V +ALMNRPTRGERRF YW L RFL
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYWALFRFL 47
>UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila
melanogaster|Rep: CG8495-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 55
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 220 AESCSNRHGLIRKYGLNICR 279
+ +CSNRHGLIRKYGLNICR
Sbjct: 20 SRACSNRHGLIRKYGLNICR 39
>UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31;
Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila
melanogaster (Fruit fly)
Length = 56
Score = 43.6 bits (98), Expect = 0.007
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 226 SCSNRHGLIRKYGLNICR 279
+CSNRHGLIRKYGLNICR
Sbjct: 23 ACSNRHGLIRKYGLNICR 40
>UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal
protein S29; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S29 -
Ornithorhynchus anatinus
Length = 168
Score = 41.9 bits (94), Expect = 0.021
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
CSNRHGLIRKYGLN+CR
Sbjct: 87 CSNRHGLIRKYGLNMCR 103
>UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66;
Eukaryota|Rep: 40S ribosomal protein S29 - Homo sapiens
(Human)
Length = 56
Score = 41.9 bits (94), Expect = 0.021
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
CSNRHGLIRKYGLN+CR
Sbjct: 24 CSNRHGLIRKYGLNMCR 40
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 38.7 bits (86), Expect = 0.20
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 454 DPXMIXYIDEFGQTTTKMQ 510
DP MI YIDEFGQTTT+MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.5 bits (83), Expect = 0.46
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2
Query: 704 APNTQTASPRXLADSLMQ 651
APNTQTASPR LADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4;
Eukaryota|Rep: 40S ribosomal protein S29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 56
Score = 37.1 bits (82), Expect = 0.61
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
C N HGLIRKYGLN CR
Sbjct: 24 CGNSHGLIRKYGLNCCR 40
>UniRef50_P90983 Cluster: Ribosomal protein, small subunit protein
29; n=18; Eukaryota|Rep: Ribosomal protein, small
subunit protein 29 - Caenorhabditis elegans
Length = 56
Score = 34.7 bits (76), Expect = 3.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
C+ HGLIRKYGL++CR
Sbjct: 24 CAGHHGLIRKYGLDLCR 40
>UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal
protein S29; n=4; Theria|Rep: PREDICTED: similar to
ribosomal protein S29 - Pan troglodytes
Length = 56
Score = 34.3 bits (75), Expect = 4.3
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 232 SNRHGLIRKYGLNICR 279
SNRHG IRKYGLN CR
Sbjct: 25 SNRHGRIRKYGLNKCR 40
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 33.5 bits (73), Expect = 7.5
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = +1
Query: 604 IHFMFXVQGEVWXGFFCINESANXRGEAVXVLGALXXPRSXXRXARSFGXG 756
+H F + + W CI + A R EAV VL AL RS R RS G G
Sbjct: 252 VHCPFSTR-DTWRAS-CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCG 300
>UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: FMN-binding
domain protein precursor - Clostridium beijerinckii
NCIMB 8052
Length = 364
Score = 33.5 bits (73), Expect = 7.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 496 TTKMQ*KKCFICEICD-AIALFVTIISCNKQVNNNNCIH 609
T K C C+ CD A + + I +CNK VN+ NCI+
Sbjct: 167 TIKRDANSCINCKRCDKACDMNIKISTCNKTVNSLNCIN 205
>UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=2;
Fungi/Metazoa group|Rep: 40S ribosomal protein S29,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 86
Score = 33.1 bits (72), Expect = 9.9
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
C++R GLIRKYG++ICR
Sbjct: 24 CAHRAGLIRKYGMDICR 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,317,726
Number of Sequences: 1657284
Number of extensions: 9378310
Number of successful extensions: 19225
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19220
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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