Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J02
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    33   0.23 
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     33   0.23 
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    33   0.23 
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224...    29   5.0  
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384...    29   6.7  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +1

Query: 229 CSNRHGLIRKYGLNICR 279
           C N HGLIRKYGL  CR
Sbjct: 24  CGNPHGLIRKYGLMCCR 40


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +1

Query: 229 CSNRHGLIRKYGLNICR 279
           C N HGLIRKYGL  CR
Sbjct: 24  CGNPHGLIRKYGLMCCR 40


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +1

Query: 229 CSNRHGLIRKYGLNICR 279
           C N HGLIRKYGL  CR
Sbjct: 24  CGNPHGLIRKYGLMCCR 40


>02_02_0453 +
           10420585-10421661,10422015-10422146,10422232-10422456,
           10422555-10422680,10422777-10422839,10423214-10423296,
           10424078-10424309,10424421-10424489,10424532-10424731,
           10424819-10424894,10425015-10425081,10425194-10425471,
           10425600-10425787,10426235-10426391,10426496-10426741
          Length = 1072

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 245 PCLLEQDSA*XEXLVPELRGXEDQRFAXAHLKEMKW 138
           P + + DS   + LVP+  G +D  F  A L +++W
Sbjct: 728 PKVSQSDSKLKDSLVPKGHGADDSSFRKAQLSDLEW 763


>03_02_0740 -
           10836752-10837052,10837756-10837814,10837901-10838476,
           10839965-10841686,10841776-10842173,10842264-10842318,
           10842989-10843048,10843444-10843540,10844885-10844955,
           10845029-10845109,10846054-10846124,10847951-10848119,
           10848521-10848683,10848752-10848942,10849037-10849168
          Length = 1381

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 109 RPHGKRANWNEKNDQVXKSPKXERKAPSRXXGRXXL 2
           RPH  R + N+++ +  KSPK +   P R   R  L
Sbjct: 522 RPHKSRKSRNDRSSKRKKSPKSKGLRPQRRAARNAL 557


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,461,788
Number of Sequences: 37544
Number of extensions: 269504
Number of successful extensions: 487
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)