Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J02
         (900 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    41   6e-05
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       25   3.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   7.2  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 40.7 bits (91), Expect = 6e-05
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 226 SCSNRHGLIRKYGLNICR 279
           +CSN HG+IRKYGLNICR
Sbjct: 23  ACSNNHGMIRKYGLNICR 40


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 472 YIDEFGQTTTKMQ*KKCFICEICDAIALFVT 564
           ++D  GQ T + +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 177  PKICVGPFERNEMVDARNEQQ 115
            P   VGP +RN+++ AR E++
Sbjct: 1050 PSHPVGPSDRNQVIAARRERR 1070


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,462
Number of Sequences: 2352
Number of extensions: 10124
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)