Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J02
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29 pro... 42 0.003
L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens (c... 42 0.003
BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29 p... 42 0.003
BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29 p... 42 0.003
AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29 p... 42 0.003
U18985-1|AAA75315.1| 729|Homo sapiens triadin protein. 31 5.7
AL603911-1|CAI14448.1| 721|Homo sapiens triadin protein. 31 5.7
AL603902-1|CAH70824.1| 721|Homo sapiens triadin protein. 31 5.7
AL445259-1|CAI41045.1| 721|Homo sapiens triadin protein. 31 5.7
AL357352-1|CAI16757.1| 721|Homo sapiens triadin protein. 31 5.7
AL133257-1|CAI19636.1| 721|Homo sapiens triadin protein. 31 5.7
AJ489257-1|CAD33526.2| 461|Homo sapiens triadin protein. 31 5.7
>U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
CSNRHGLIRKYGLN+CR
Sbjct: 24 CSNRHGLIRKYGLNMCR 40
>L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens
(clone cori-1cl5) S29 ribosomal protein mRNA, complete
cds. ).
Length = 56
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
CSNRHGLIRKYGLN+CR
Sbjct: 24 CSNRHGLIRKYGLNMCR 40
>BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
CSNRHGLIRKYGLN+CR
Sbjct: 24 CSNRHGLIRKYGLNMCR 40
>BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
CSNRHGLIRKYGLN+CR
Sbjct: 24 CSNRHGLIRKYGLNMCR 40
>AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 229 CSNRHGLIRKYGLNICR 279
CSNRHGLIRKYGLN+CR
Sbjct: 24 CSNRHGLIRKYGLNMCR 40
>U18985-1|AAA75315.1| 729|Homo sapiens triadin protein.
Length = 729
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 127 KRATNERPHGKRANWNEKNDQVXKSPKXERKAPS 26
K A E+P GK+ EK+ + KSPK E PS
Sbjct: 385 KPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPS 418
>AL603911-1|CAI14448.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 127 KRATNERPHGKRANWNEKNDQVXKSPKXERKAPS 26
K A E+P GK+ EK+ + KSPK E PS
Sbjct: 385 KPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPS 418
>AL603902-1|CAH70824.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 127 KRATNERPHGKRANWNEKNDQVXKSPKXERKAPS 26
K A E+P GK+ EK+ + KSPK E PS
Sbjct: 385 KPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPS 418
>AL445259-1|CAI41045.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 127 KRATNERPHGKRANWNEKNDQVXKSPKXERKAPS 26
K A E+P GK+ EK+ + KSPK E PS
Sbjct: 385 KPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPS 418
>AL357352-1|CAI16757.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 127 KRATNERPHGKRANWNEKNDQVXKSPKXERKAPS 26
K A E+P GK+ EK+ + KSPK E PS
Sbjct: 385 KPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPS 418
>AL133257-1|CAI19636.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 127 KRATNERPHGKRANWNEKNDQVXKSPKXERKAPS 26
K A E+P GK+ EK+ + KSPK E PS
Sbjct: 385 KPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPS 418
>AJ489257-1|CAD33526.2| 461|Homo sapiens triadin protein.
Length = 461
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 127 KRATNERPHGKRANWNEKNDQVXKSPKXERKAPS 26
K A E+P GK+ EK+ + KSPK E PS
Sbjct: 386 KPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPS 419
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,378,551
Number of Sequences: 237096
Number of extensions: 1476308
Number of successful extensions: 3779
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3779
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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