Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_J02
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1041|AAN13446.1|   55|Drosophila melanogaster CG8495-PC...    44   3e-04
BT001305-1|AAN71060.1|   43|Drosophila melanogaster AT13329p pro...    44   4e-04
AY075533-1|AAL68340.2|   68|Drosophila melanogaster RH06643p pro...    44   4e-04
AE014297-1040|AAF54450.1|   56|Drosophila melanogaster CG8495-PA...    44   4e-04
AE014298-1322|AAF46483.1|  663|Drosophila melanogaster CG17446-P...    31   2.8  

>AE014297-1041|AAN13446.1|   55|Drosophila melanogaster CG8495-PC,
           isoform C protein.
          Length = 55

 Score = 44.0 bits (99), Expect = 3e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 220 AESCSNRHGLIRKYGLNICR 279
           + +CSNRHGLIRKYGLNICR
Sbjct: 20  SRACSNRHGLIRKYGLNICR 39


>BT001305-1|AAN71060.1|   43|Drosophila melanogaster AT13329p
           protein.
          Length = 43

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +1

Query: 226 SCSNRHGLIRKYGLNICR 279
           +CSNRHGLIRKYGLNICR
Sbjct: 10  ACSNRHGLIRKYGLNICR 27


>AY075533-1|AAL68340.2|   68|Drosophila melanogaster RH06643p
           protein.
          Length = 68

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +1

Query: 226 SCSNRHGLIRKYGLNICR 279
           +CSNRHGLIRKYGLNICR
Sbjct: 35  ACSNRHGLIRKYGLNICR 52


>AE014297-1040|AAF54450.1|   56|Drosophila melanogaster CG8495-PA,
           isoform A protein.
          Length = 56

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +1

Query: 226 SCSNRHGLIRKYGLNICR 279
           +CSNRHGLIRKYGLNICR
Sbjct: 23  ACSNRHGLIRKYGLNICR 40


>AE014298-1322|AAF46483.1|  663|Drosophila melanogaster CG17446-PA
           protein.
          Length = 663

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 271 CSNRTCGLSHACWSRIRHXPRXLFRSC 191
           C    C    AC  R+ H PR +FR+C
Sbjct: 192 CRRPNCNQCDACRVRVGHKPRCIFRTC 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,387,958
Number of Sequences: 53049
Number of extensions: 452668
Number of successful extensions: 909
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)