Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_J01
(853 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 93 6e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 93 1e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 43 0.011
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.020
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.079
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 39 0.18
UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;... 35 2.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 93.5 bits (222), Expect = 6e-18
Identities = 42/56 (75%), Positives = 42/56 (75%)
Frame = +3
Query: 630 PWXAPSCALLFRPXRLPDTCPPFSLREAWXFLIXHAVXISXRCXSXAPXCPVCXTP 797
P APSCALLFRP RLPDTCPPFSLREAW FLI HAV IS RC S AP VC P
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 66.5 bits (155), Expect = 8e-10
Identities = 33/43 (76%), Positives = 34/43 (79%)
Frame = +2
Query: 488 SKRPGTVKRPRCWRFSIGSXPLTSITKIDAQVRGGETRQDYKD 616
SK+ T R RFSIGS PLTSITKIDAQVRGGETRQDYKD
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKD 44
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 92.7 bits (220), Expect = 1e-17
Identities = 56/99 (56%), Positives = 61/99 (61%)
Frame = +2
Query: 320 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 499
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 500 GTVKRPRCWRFSIGSXPLTSITKIDAQVRGGETRQDYKD 616
RPR RFSIGS PLTSI K DAQ+ GGETRQDYKD
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKD 112
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 496 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 383
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 506 VKRPRCWRFSIGSXPLTSITKIDAQVRGGETRQDYKD 616
V+ PR RFSIGS PLTSITK DAQ+ GGETRQDYKD
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKD 80
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 296 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 463
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 680 GYLSAFLPSGSVXLSHXSRCXYL 748
GYLSAFLPSGSV LSH SRC YL
Sbjct: 12 GYLSAFLPSGSVALSHSSRCRYL 34
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 415 HSKAVIRLSTESGDNAGKNM 474
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 42.7 bits (96), Expect = 0.011
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = -3
Query: 851 RPXILRDQXYTERPXSXD--GGXAHRTXXSXRXTPX*DTYSVXYEKAPRFPKGERRTGIR 678
RP +D Y + S G A+ S R P DT SV YEKAPRFPKG++ +
Sbjct: 7 RPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVS 66
Query: 677 *AXGSEQESAXGSXPGGNAWYLYSPVG 597
A G + SPVG
Sbjct: 67 GKRQGRNRRAHEGAAGEKSPASLSPVG 93
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.020
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 222 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 344
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.079
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 366 ERGSGRAPNTQTASPRALADSLMQ 295
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 38.7 bits (86), Expect = 0.18
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 395 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSXPLTSITK 568
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 569 IDAQVRGGETRQDYK 613
I Q + +T+ +YK
Sbjct: 82 IYPQFKNTQTQHNYK 96
>UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 211
Score = 35.1 bits (77), Expect = 2.3
Identities = 29/101 (28%), Positives = 39/101 (38%)
Frame = -1
Query: 814 GXRRXTGVXHTGQXGAXDXHRXEIXTA*XMRKXHASRREKGGQVSGKRQGRNRRAXEGAX 635
G R G GQ A + + ++ R+ R GG+ GKR+ R R+
Sbjct: 53 GAPRREGKDWKGQRAAKEGEKGKLPLGGRRRRSETGRGTAGGREGGKRRERGARSSSRHR 112
Query: 634 QGETPGIFIVLSGFATSDLSVDFCDARQGXGAYGKTPATRP 512
+ G + S D DA QG A GK PA RP
Sbjct: 113 PRQIRGRG-EAQARPRQEASGD--DATQGGRARGKPPAARP 150
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.2
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 505 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 383
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,480,280
Number of Sequences: 1657284
Number of extensions: 11595798
Number of successful extensions: 27638
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27619
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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