Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I22
(966 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07
SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-06
SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18) 49 7e-06
SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17) 47 2e-05
SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37) 42 6e-04
SB_34101| Best HMM Match : K_tetra (HMM E-Value=3.5e-40) 42 0.001
SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_27579| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18) 38 0.009
SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45) 37 0.021
SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37) 34 0.15
SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34) 32 0.61
SB_36328| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.80
SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05) 32 0.80
SB_36418| Best HMM Match : Ion_trans (HMM E-Value=3.5e-28) 31 1.1
SB_16503| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 30 2.4
SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39) 30 2.4
SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38) 30 3.2
SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38) 30 3.2
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9) 30 3.2
SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34) 29 4.3
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 29 4.3
SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45) 29 4.3
SB_29187| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_18563| Best HMM Match : K_tetra (HMM E-Value=4.34403e-44) 28 9.9
SB_9848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 55.2 bits (127), Expect = 8e-08
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDS-EHPRDARGRIFFDRDGVLFRYVLDYLQ 264
++LNVGG H+ TT TL PD S RD+ GR F DRDG LFRY+L++L+
Sbjct: 277 IDLNVGGNHFTTTLLTLTTFPDSMLGSMFSGRIPVNRDSNGRFFIDRDGTLFRYILNFLR 336
Query: 265 RRV 273
V
Sbjct: 337 SNV 339
>SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 52.8 bits (121), Expect = 4e-07
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +1
Query: 190 PRDARGRIFFDRDGVLFRYVLDYLQRRVDSFCRXCFKKTKRLXEGNQNFKELLGLEKCSP 369
PRD+RGR F DRDGVLFRY+LDYL R F + +RL ++FK L G+ +
Sbjct: 123 PRDSRGRFFIDRDGVLFRYILDYL-RNCKLALPEGFNERERLTMEAEHFK-LKGMVRAIQ 180
Query: 370 EKADS 384
+ D+
Sbjct: 181 REKDN 185
>SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDSEH-PRDARGRIFFDRDGVLFRYVLDYLQ 264
+ LNVGG Y T+ TL R D S ++ RD RG F DRDG LFRY+L++L+
Sbjct: 9 VNLNVGGYVYTTSYKTLTRCRDSMLGAMFSGRQNLARDTRGNFFIDRDGSLFRYILNFLR 68
>SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18)
Length = 307
Score = 48.8 bits (111), Expect = 7e-06
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDS-EHPRDARGRIFFDRDGVLFRYVLDYLQ 264
+ LNVGG +Y +T TL + P + + PRD +G+ F DRDG FRY+L +L+
Sbjct: 85 VSLNVGGYNYTSTAYTLTQYPKSVLAQMCNGIIPVPRDLKGQQFIDRDGATFRYILTFLR 144
>SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17)
Length = 271
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRAS--DSEHPRDARGRIFFDRDGVLFRYVLDYL 261
+ELNVGG +++T+ TL R D R S SE +D G+ F DRDG F Y+LDYL
Sbjct: 38 IELNVGGKYFSTSVFTLTRIKDSLLGRIFSGRQSELDKDNSGKYFIDRDG--FLYILDYL 95
Query: 262 QRR 270
+ +
Sbjct: 96 RSK 98
>SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37)
Length = 583
Score = 42.3 bits (95), Expect = 6e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDY 258
++LNVGG + +D L + PD + D R FFDRD ++F+Y+LD+
Sbjct: 47 IKLNVGGYQFEILKDNLKKYPDTLLGGERKKYFYDDD-RKEYFFDRDPIMFKYILDF 102
>SB_34101| Best HMM Match : K_tetra (HMM E-Value=3.5e-40)
Length = 440
Score = 41.5 bits (93), Expect = 0.001
Identities = 30/96 (31%), Positives = 46/96 (47%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQRRV 273
LN+ G + T TL + P+ + DS + ++ + FFDRD V FR+VL+Y ++
Sbjct: 48 LNISGRKFETWETTLEKYPETLLGGKEKDSFYDKEKQ-EYFFDRDPVFFRHVLNYYRKGK 106
Query: 274 DSFCRXCFKKTKRLXEGNQNFKELLGLEKCSPEKAD 381
F L E + +KE L K SP+ D
Sbjct: 107 LHF---------SLEECGKFYKEELKFFKISPDNVD 133
>SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 94 LNVGGVHYATTR-DTLLREPD-FAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQ 264
LNVGG H+ TTR TL ++ D A + D+ GR F DRDG F ++L+YL+
Sbjct: 85 LNVGG-HFFTTRLSTLTKDQDSMLASMFSGRFNLDVDSEGRFFIDRDGTYFVFLLNYLR 142
>SB_27579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDY 258
+NVGG + T DTL R P S+ R F DRD LFRY+L+Y
Sbjct: 74 INVGGRRFITWEDTLRRFPHTLLGSEELSSKFYDKERKEYFIDRDPHLFRYILNY 128
>SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18)
Length = 495
Score = 38.3 bits (85), Expect = 0.009
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQ 264
+ LN+GG H+ +R TL+ + S + A G F +RD FRY+L++++
Sbjct: 18 VHLNIGGKHFTVSRRTLMDDSSTLFHALLSSPKIKPQADGCYFINRDPKHFRYILNFIR 76
>SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45)
Length = 623
Score = 37.1 bits (82), Expect = 0.021
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDY 258
+NV G + T R+TL R P+ D + + + FFDRD LFR++L+Y
Sbjct: 42 INVSGRRFETWRNTLARFPETLLGSDEKDYFYDAETK-EYFFDRDPDLFRHLLNY 95
>SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPD----FAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDY 258
LNVGG + T TL PD + A R D P R FFDR+ +F +VL+Y
Sbjct: 21 LNVGGQKHETYVSTLASVPDTRLAWIAERSMKDPR-PLAQRREFFFDRNPSIFTHVLNY 78
>SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQ 264
++LN+GG + +T TL R + + A + P +F DRD +FR+VL++++
Sbjct: 4 VKLNIGGSEFVSTLQTLTRRQSWFSVTDAY-KKSPSGDYYTLFLDRDPKVFRHVLNFIR 61
>SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37)
Length = 464
Score = 34.3 bits (75), Expect = 0.15
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDY 258
LNV G + T TL + P+ A + ++ R F DRD +FRY+L+Y
Sbjct: 72 LNVSGRRFCTWESTLKKYPNTLLGSDALNLYFDKEKR-EYFLDRDPHIFRYILNY 125
>SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34)
Length = 336
Score = 32.3 bits (70), Expect = 0.61
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQ 264
+ LNVGG + L R P+ + ++ + FFDRD +FRY+L+YL+
Sbjct: 71 IALNVGGRVFVVRTHLLDRFPNSLLGSLQIGQFYDKNKQ-EFFFDRDPDVFRYILNYLR 128
>SB_36328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1526
Score = 32.3 bits (70), Expect = 0.61
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPD----FAARRRASDSEHPRDARGRIFFDRDGVLFRYVLD 255
L +NVGG Y T + TL PD + A R E+ + FFDR +F +L+
Sbjct: 19 LVINVGGRRYETFQSTLASIPDTRLAWIAGRPHETPEYDT-SHNEYFFDRHSAIFEDILN 77
Query: 256 Y 258
Y
Sbjct: 78 Y 78
>SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 97 NVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDY 258
NV G + T TL R P+ + + + + F DRD LFR+VL+Y
Sbjct: 65 NVSGRRFETWESTLKRFPNTVLGSKMIQRFYDTNTK-EYFIDRDPYLFRFVLNY 117
>SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05)
Length = 190
Score = 31.9 bits (69), Expect = 0.80
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Frame = +1
Query: 295 FKKTKRLXEGNQ-------NFKELLGLEKCSPEKADSSVRQNREAKG 414
FK+ RL GN+ N K+ LG+E+ P+K+D + N++A G
Sbjct: 142 FKEALRLEPGNKQAQQEILNLKQKLGIEEKPPQKSDKPAKVNKKALG 188
>SB_36418| Best HMM Match : Ion_trans (HMM E-Value=3.5e-28)
Length = 466
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQ 264
+ +NV G + T DTL R P + + R +F+RD +F +L Y Q
Sbjct: 56 IRINVSGEMFETFEDTLARYPTTLLGSQNKRRRYFDPRRCEYYFERDRTVFNAILFYYQ 114
>SB_16503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQ 264
+NV G+ + T TL PD +++ R FFDR+ F +L Y Q
Sbjct: 154 INVSGLKFETHVQTLESNPDTLLGNAVKRAKYYDSVRNEYFFDRNRPAFDAILFYYQ 210
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 214 FFDRDGVLFRYVLDYLQRRVDSFCRXCFKKTKRLXEGNQ---NFKELLGL 354
F DRDG FR++L+YL+ D F F + + + Q NF +L GL
Sbjct: 127 FLDRDGTHFRHILNYLR---DGFLAETFPTDEVILKEIQQEANFYQLTGL 173
>SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39)
Length = 218
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASD--SEHPRDARGRIFFDRDGVLFRYVLDY 258
+NVGG + + TL PD A ++ R IFFDR LF +L+Y
Sbjct: 18 INVGGKRHESYLSTLRNIPDTRLAWLAESIMNKQSEQPRKEIFFDRHPDLFAIILNY 74
>SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1626
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 80 PEVSSSTWAACTMPLRAIRCYASQTSLPAAALQIPNIRATLVVASSS 220
P+VSSS+W A T + + ++ TS AA+ + + + VASS+
Sbjct: 344 PQVSSSSWPAQTPSVLGVTSPSTTTSTSTAAVYPTAVSSLVSVASST 390
>SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 404
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDS--EHPRDARGRIFFDRDGVLFRYVLDYL 261
+ +NV G + T TL + P SD + + + F DRD +FRY+L++
Sbjct: 27 ITINVSGKKFVTWEKTLRKHPSTLL---GSDRLMQFFDETKREFFLDRDPHMFRYILNFY 83
Query: 262 QRRVDSFCRXCFKKTKRLXEGNQNFKELLGLEKCSPEKADS 384
+ C K + FKE LG PE +S
Sbjct: 84 R---------CGKLHTSSEDCYSAFKEELGFYGIPPENIES 115
>SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 347
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPDFAARRRASDS--EHPRDARGRIFFDRDGVLFRYVLDYL 261
+ +NV G + T TL + P SD + + + F DRD +FRY+L++
Sbjct: 27 ITINVSGKKFVTWEKTLRKHPSTLL---GSDRLMQFFDETKREFFLDRDPHMFRYILNFY 83
Query: 262 QRRVDSFCRXCFKKTKRLXEGNQNFKELLGLEKCSPEKADS 384
+ C K + FKE LG PE +S
Sbjct: 84 R---------CGKLHTSSEDCYSAFKEELGFYGIPPENIES 115
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 35 DFDTAPSASNMADAPPEVSSSTW---AACTMPLRAIRCYASQTSLPAAALQIPNIRATLV 205
D T+P ++ +P +S+ TW A+C +P+ + S ++ +PN A +
Sbjct: 851 DGTTSPMEETLSVSPSILSAETWTAPASCAIPVHISDLHTSLSAESLPLHAVPNDIAPIR 910
Query: 206 VASSSIE 226
++SSS E
Sbjct: 911 MSSSSDE 917
>SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9)
Length = 749
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 80 PEVSSSTWAACTMPLRAIRCYASQTSLPAAALQIPNIRATLVVASSS 220
P+VSSS+W A T + + ++ TS AA+ + + + VASS+
Sbjct: 324 PQVSSSSWPAQTPSVLGVTSPSTTTSTSTAAVYPTAVSSLVSVASST 370
>SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2484
Score = 29.9 bits (64), Expect = 3.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPD-----FAARRRASDSEHPRDA-RGRIFFDRDGVLFRYVLD 255
LNVGG + T TL PD R ++ + DA + FFDR +F ++L+
Sbjct: 1198 LNVGGFKHETYISTLRNIPDSRLCNLGERHQSMNKASEYDANKNEYFFDRHPGVFAHILN 1257
Query: 256 Y 258
Y
Sbjct: 1258 Y 1258
>SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34)
Length = 722
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQR-R 270
L VGG + T + L + P + + + + + F+RD ++FR++L+Y + R
Sbjct: 31 LKVGGRVFETWEENLRKHPSTLLGSKEKELYYNPETK-MYTFERDPLMFRHILNYYRAGR 89
Query: 271 VDSFCRXC 294
+ C C
Sbjct: 90 LHYSCDYC 97
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 29.5 bits (63), Expect = 4.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 88 LELNVGGVHYATTRDTLLREPD----FAARRRASDSEHPRDARGRIFFDRDGVLFRYVLD 255
+ +NVGG + T TL PD + A + E+ + G FFDR +F VL+
Sbjct: 20 ITINVGGFRHNTFMSTLKNIPDTRLSWLAENHTNCVEYDQ-VLGEYFFDRHPRIFAEVLN 78
Query: 256 Y 258
Y
Sbjct: 79 Y 79
>SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45)
Length = 1032
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 356 RNAVPRKQIPPSAKIAKRRDASRVGIPGQFWHSERRTGPR 475
R+ VPR +P A +RR R +PG +R PR
Sbjct: 323 RDVVPRDTLPSGAHSKRRRKVPRYSLPGGAHAQDRDVVPR 362
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 353 SRNAVPRKQIPPSAKIAKRRDASRVGIPGQFWHSERRTGPR 475
+R+ VPR +P A +RR R +PG R PR
Sbjct: 271 NRDVVPRDTLPSGAHSKRRRKVPRYSLPGGAHAQNRDVVPR 311
>SB_29187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 286 RXCFKKTKRLXEGNQNFKELLGLEKCSPEKADSSVRQNREAKGCFTGGDTGAVLAFGTP 462
+ CF ++ N +L L++ P+ SS+RQ + VLAFGTP
Sbjct: 108 KACFAAVVQIQSQTDN---MLALKRALPQSFRSSIRQTMSKHTLSGPTEMRTVLAFGTP 163
>SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 28.7 bits (61), Expect = 7.5
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +1
Query: 130 DTLLREPDFAARRRASDSEHPRDARGRIFFDRDGVLFRYVLDYLQRRVDSFCRXCFKKTK 309
D L P F AR D +P A+G + + V F Y+ R + ++ + K
Sbjct: 8 DFSLSVPQFFARIDCYDWSYPHTAKGGSWVTVEVVTFPYLSHNSSRGLTAYTGLIHSRRK 67
Query: 310 RLXEGNQNFKELLG 351
+ E ++F+ G
Sbjct: 68 KRPEKTRSFRRTTG 81
>SB_18563| Best HMM Match : K_tetra (HMM E-Value=4.34403e-44)
Length = 191
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 94 LNVGGVHYATTRDTLLREPDFAARRRASDSEHPRD---ARGRIFFDRDGVLFRYVLDY 258
LNVGG + T TL PD ++ D IFFDR +F VL+Y
Sbjct: 32 LNVGGYRHETYLSTLRVVPDSRLAWIGENASKQADYDPETNEIFFDRHPGVFANVLNY 89
>SB_9848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 275 TRFAGXVSRKQSAFXRGTKTLKNYWGSRN--AVPRKQI 382
T++AG ++ + L +YW SRN VPR++I
Sbjct: 272 TKYAGDKGENDPSYLKRDSILGHYWESRNRDIVPRQEI 309
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,925,976
Number of Sequences: 59808
Number of extensions: 385043
Number of successful extensions: 1247
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2848211039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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