Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I21
         (1033 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    34   0.21 
02_05_1162 - 34593101-34594624                                         32   0.65 
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.0  
01_05_0166 + 18844468-18845184,18847394-18847690                       29   6.0  
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    29   7.9  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 7/88 (7%)
 Frame = -1

Query: 556  PXXGFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPP------- 398
            P      G P    PP      PP P    LGG + P       G      PP       
Sbjct: 1100 PPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGG 1159

Query: 397  XXXPPFPQKVRGXGXXPKXSXXXXPPPP 314
               PP P   RG    P       PPPP
Sbjct: 1160 PPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 6/91 (6%)
 Frame = -1

Query: 547  GFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXX------P 386
            G    PP    P    GV PP P    +GG   P       GF     PP         P
Sbjct: 1131 GGHQAPPAPPLPEGIGGVPPPPP----VGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPP 1186

Query: 385  PFPQKVRGXGXXPKXSXXXXPPPPIXPVXXG 293
            P P+   G G  P  +    P PP+ P   G
Sbjct: 1187 PPPRGHGGVGGPP--TPPGAPAPPMPPGVPG 1215


>02_05_1162 - 34593101-34594624
          Length = 507

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 22/84 (26%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
 Frame = -1

Query: 511 PXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXSXX 332
           P      PP P    L   K      F    N    PP   PP P++       P  +  
Sbjct: 156 PVQSPTPPPPPQPSGLLEPKQEQRQWFVDALNSVHQPPPPSPPQPKQESVSVQSPPPAVV 215

Query: 331 XXP-PPPIXPVXXGXKILXNXXXG 263
             P PPP+ P   G   L     G
Sbjct: 216 PMPQPPPVLPAPTGPDYLFGLDNG 239


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
 Frame = -1

Query: 532 PPFLXXPPXXXGVXP--PXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGX 359
           PP    PP    + P  P P  +   G   P  G   P       PP   PP  Q     
Sbjct: 13  PPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNF 72

Query: 358 GXXPKXSXXXXPPP 317
           G  P       PPP
Sbjct: 73  GPGPPQQQQPPPPP 86


>01_05_0166 + 18844468-18845184,18847394-18847690
          Length = 337

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 409 KXPPXXXPPFPQKVRGXGXXPKXSXXXXPPPPIXPV 302
           + PP    P P  +R     PK      PPPP  P+
Sbjct: 7   RKPPATFAPPPSVLRNSRPAPKAPAAQPPPPPTLPI 42


>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 707  RXPPPPPPXXXXXXFFXKXXXPPP 636
            R PPPPPP       F +   PPP
Sbjct: 963  RPPPPPPPPNVAPPPFTRQDIPPP 986


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,335,894
Number of Sequences: 37544
Number of extensions: 335487
Number of successful extensions: 3131
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2872
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3036070960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)